Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Translation elongation factor EF1B, gamma chain chr1:21377873-21380114 FORWARD LENGTH=413

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene759 SustainPine v3.0 1985
• AutoFact: Elongation factor 1-gamma n=1 Tax=Prunus avium RepID=EF1G_PRUAV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene13173 SustainPine v3.0 2428
• AutoFact: Elongation factor 1-gamma n=1 Tax=Prunus avium RepID=EF1G_PRUAV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-gamma 3.063e-12
Misassembled
sp_v3.0_unigene34366 SustainPine v3.0 2193
• AutoFact: Elongation factor 1-gamma n=1 Tax=Prunus avium RepID=EF1G_PRUAV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene76467 SustainPine v3.0 331
• AutoFact: Translation elongation factor n=1 Tax=Citrus maxima RepID=C3VIC2_CITMA 5.99994e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-gamma 4.047e-12
Internal
sp_v3.0_unigene126786 SustainPine v3.0 1763
• AutoFact: Elongation factor 1-gamma n=1 Tax=Prunus avium RepID=EF1G_PRUAV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene127024 SustainPine v3.0 733
• AutoFact: RecName: Full=Elongation factor 1-gamma 2; Short=EF-1-gamma 2; AltName: Full=eEF-1B gamma 2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-gamma 2.541e-12
C-terminus
sp_v3.0_unigene130039 SustainPine v3.0 432
• AutoFact: Translation elongation factor n=1 Tax=Citrus maxima RepID=C3VIC2_CITMA 3.99931e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-gamma 3.448e-12
Internal
sp_v3.0_unigene131950 SustainPine v3.0 526
• AutoFact: elongation factor 1-gamma [Glycine max] 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-gamma 4.351e-12
N-terminus
sp_v3.0_unigene143345 SustainPine v3.0 501
• AutoFact: Elongation factor 1-gamma 3 n=4 Tax=Andropogoneae RepID=B6T7G7_MAIZE 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-gamma 2.228e-12
C-terminus
sp_v3.0_unigene151359 SustainPine v3.0 407
• AutoFact: Translation elongation factor EF-1 gamma n=1 Tax=Bombina orientalis RepID=B6VFL3_BOMOR 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: eEF-1B gamma 2 6.904e-09
C-terminus
sp_v3.0_unigene152067 SustainPine v3.0 509
• AutoFact: Glutathione S-transferase domain-containing protein n=1 Tax=Polysphondylium pallidum RepID=D3BFU2_POLPA 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Elongation factor 1-gamma 4.01e-12
C-terminus
sp_v3.0_unigene188640 SustainPine v3.0 336
• AutoFact: Eukaryotic translation elongation factor 1 gamma, putative n=2 Tax=Entamoeba RepID=C4M7Y2_ENTHI 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene202572 SustainPine v3.0 619
• AutoFact: RecName: Full=Elongation factor 1-gamma 2; Short=EF-1-gamma 2; AltName: Full=eEF-1B gamma 2 2.0e-40
• FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
• Sma3: Elongation factor 1-gamma 2.228e-12
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain