Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: SKD1, VPS4, ATSKD1 AAA-type ATPase family protein chr2:11781226-11783730 FORWARD LENGTH=435

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene10022 SustainPine v3.0 2336
• AutoFact: Vacuolar protein sorting-associated protein VPS4, putative n=3 Tax=Spermatophyta RepID=B9SCR4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Suppressor of K+ transport growth defect-like protein 3.584e-07
Complete
sp_v3.0_unigene10246 SustainPine v3.0 2294
• AutoFact: Vacuolar protein sorting-associated protein VPS4, putative n=3 Tax=Spermatophyta RepID=B9SCR4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene34533 SustainPine v3.0 392
• AutoFact: AAA-ATPase-like protein n=9 Tax=Poaceae RepID=Q8LKV4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Suppressor of K+ transport growth defect-like protein 5.85e-07
Internal
sp_v3.0_unigene35328 SustainPine v3.0 761
• AutoFact: Putative p60 katanin n=2 Tax=Poaceae RepID=Q5ZDH2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Suppressor of K+ transport growth defect-like protein 1.922e-08
C-terminus
sp_v3.0_unigene74116 SustainPine v3.0 206
• AutoFact: vacuolar sorting ATPase Vps4 [Aspergillus fumigatus Af293] gb|EAL92645.1| vacuolar sorting ATPase Vps4, putative [Aspergillus fumigatus Af293] gb|EDP52808.1| vacuolar sorting ATPase Vps4, putative [Aspergillus fumigatus A1163] 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene74362 SustainPine v3.0 250
• AutoFact: Vacuolar sorting protein 4b, putative (EC:3.6.4.3) 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Suppressor of K+ transport growth defect-like protein 1.197e-08
Internal
sp_v3.0_unigene76859 SustainPine v3.0 156
• AutoFact: Vacuolar protein sorting factor 4B n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9CD06_9EUKA 6.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Suppressor of K+ transport growth defect-like protein 5.596e-09
Internal
sp_v3.0_unigene77685 SustainPine v3.0 401
• AutoFact: ATPase, AAA family protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q22MC3_TETTH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Suppressor of K+ transport growth defect-like protein 1.969e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain