Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ARF6 auxin response factor 6 chr1:10686125-10690036 REVERSE LENGTH=935

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene1568 SustainPine v3.0 3619
• AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
• FL-Next: Isoform 2 of Auxin response factor 6 OS=Arabidopsis thaliana GN=ARF6 0.0
• Sma3: Auxin response factor, putative 8.08829e-42
Complete
sp_v3.0_unigene12324 SustainPine v3.0 4347
• AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 6.80891e-42
Complete
sp_v3.0_unigene13963 SustainPine v3.0 1166
• AutoFact: Putative auxin response factor 6 n=1 Tax=Amborella trichopoda RepID=E0WD84_AMBTC 0.0
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 3.37601e-41
Misassembled
sp_v3.0_unigene23988 SustainPine v3.0 2896
• AutoFact: auxin response factor 6 [Arabidopsis thaliana] sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6 gb|AAT67072.1| ARF6 [Arabidopsis thaliana] gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Auxin response factor, putative 2.562e-34
C-terminus
sp_v3.0_unigene62773 SustainPine v3.0 122
• AutoFact: Auxin response factor 6 n=20 Tax=rosids RepID=ARFF_ARATH 2.0e-12
• FL-Next: Isoform 2 of Auxin response factor 6 OS=Arabidopsis thaliana GN=ARF6 0.0
• Sma3: Auxin response factor, putative 4.86e-12
Internal
sp_v3.0_unigene65081 SustainPine v3.0 182
• AutoFact: Auxin response factor 1 n=1 Tax=Cucumis sativus RepID=Q6L8U3_CUCSA 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Auxin response factor, putative 1.902e-14
Internal
sp_v3.0_unigene94345 SustainPine v3.0 2089
• AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Auxin response factor, putative 8.93328e-42
Putative N-terminus
sp_v3.0_unigene99299 SustainPine v3.0 1720
• AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene105304 SustainPine v3.0 328
• AutoFact: Putative auxin response factor 6 n=1 Tax=Amborella trichopoda RepID=E0WD84_AMBTC 8.0e-30
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Sma3: Auxin response factor, putative 5.084e-17
Putative N-terminus
sp_v3.0_unigene127912 SustainPine v3.0 702
• AutoFact: pfam02309, AUX_IAA, AUX/IAA family 9.0e-05
• FL-Next: sp=Auxin response factor 17; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: P-167-1_1 0.0
C-terminus
sp_v3.0_unigene160401 SustainPine v3.0 458
• AutoFact: Auxin response factor 6 n=20 Tax=rosids RepID=ARFF_ARATH 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Auxin response factor 8 9.991e-11
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain