Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RPSAb 40s ribosomal protein SA B chr3:1309465-1310846 REVERSE LENGTH=332

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene26325 SustainPine v3.0 319
• AutoFact: 40S ribosomal protein S0 n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=RSSA_PARBA 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 1.096e-36
N-terminus
sp_v3.0_unigene140480 SustainPine v3.0 690
• AutoFact: Putative 40S Ribosomal protein [Oryza sativa Japonica Group] gb|ABF94325.1| 40S ribosomal protein SA, putative, expressed [Oryza sativa Japonica Group] gb|EAZ25828.1| hypothetical protein OsJ_09668 [Oryza sativa Japonica Group] gb|ACJ54906.1| 40S ribosoma 4.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 8.518e-25
Misassembled
sp_v3.0_unigene156465 SustainPine v3.0 350
• AutoFact: Laminin-binding protein n=1 Tax=Acanthamoeba healyi RepID=Q6V4W8_9EUKA 8.00141e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 1.096e-36
N-terminus
sp_v3.0_unigene157305 SustainPine v3.0 171
• AutoFact: 40S ribosomal protein SA n=1 Tax=Glycine max RepID=RSSA_SOYBN 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 5.057e-37
N-terminus
sp_v3.0_unigene157707 SustainPine v3.0 297
• AutoFact: 40S ribosomal protein SA n=1 Tax=Polysphondylium pallidum RepID=D3BRK4_POLPA 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 1.096e-36
Internal
sp_v3.0_unigene159024 SustainPine v3.0 291
• AutoFact: Laminin-binding protein n=1 Tax=Acanthamoeba healyi RepID=Q6V4W8_9EUKA 8.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 1.041e-28
N-terminus
sp_v3.0_unigene159226 SustainPine v3.0 339
• AutoFact: 40S ribosomal protein rpS0e n=1 Tax=Tetrahymena thermophila RepID=E6PBR9_TETTH 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 3.902e-36
Internal
sp_v3.0_unigene200380 SustainPine v3.0 365
• AutoFact: 40S ribosomal protein SA n=1 Tax=Tripneustes gratilla RepID=RSSA_TRIGR 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein SA 1.096e-36
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain