Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein L39 family protein chr4:15469931-15470366 FORWARD LENGTH=51

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene5 SustainPine v3.0 735
• AutoFact: Ribosomal protein L39e, putative n=1 Tax=Ricinus communis RepID=B9SC04_RICCO 7.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene4543 SustainPine v3.0 363
• AutoFact: putative 60S ribosomal protein L39 [Oryza sativa Japonica Group] 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene4966 SustainPine v3.0 319
• AutoFact: putative 60S ribosomal protein L39 [Oryza sativa Japonica Group] 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene17238 SustainPine v3.0 772
• AutoFact: Ribosomal protein L39e, putative n=1 Tax=Ricinus communis RepID=B9SC04_RICCO 8.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene20316 SustainPine v3.0 560
• AutoFact: putative 60S ribosomal protein L39 [Oryza sativa Japonica Group] 9.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene20909 SustainPine v3.0 464
• AutoFact: Ribosomal protein L39e, putative n=1 Tax=Ricinus communis RepID=B9SC04_RICCO 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene21016 SustainPine v3.0 372
• AutoFact: putative 60S ribosomal protein L39 [Oryza sativa Japonica Group] 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene28147 SustainPine v3.0 560
• AutoFact: 60S ribosomal protein L39 (Fragment) n=3 Tax=Bilateria RepID=B7FDL3_BRAPC 8.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytosolic 80S ribosomal protein L39 0.0
Complete
sp_v3.0_unigene31286 SustainPine v3.0 450
• AutoFact: 60S ribosomal protein L39 (Fragment) n=3 Tax=Bilateria RepID=B7FDL3_BRAPC 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L39 1.024e-13
Complete
sp_v3.0_unigene54256 SustainPine v3.0 300
• AutoFact: putative 60S ribosomal protein L39 [Oryza sativa Japonica Group] 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene58255 SustainPine v3.0 248
• AutoFact: Ribosomal protein L39e, putative n=1 Tax=Ricinus communis RepID=B9SC04_RICCO 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene58554 SustainPine v3.0 250
• AutoFact: 60S ribosomal protein L39-1 [Arabidopsis thaliana] sp|P51424.2|RL391_ARATH RecName: Full=60S ribosomal protein L39-1 gb|AAK49624.1|AF372908_1 F13D4.162/F13D4.162 [Arabidopsis thaliana] gb|AAL15360.1| AT4g31981/F13D4.162 [Arabidopsis thaliana] dbj|BAC42854 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L39 1.024e-13
Putative Complete
sp_v3.0_unigene77542 SustainPine v3.0 400
• AutoFact: putative 60S ribosomal protein L39 [Oryza sativa Japonica Group] 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene142594 SustainPine v3.0 326
• AutoFact: putative 60S ribosomal protein L39 [Oryza sativa Japonica Group] 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene144844 SustainPine v3.0 378
• AutoFact: Ribosomal protein L39e, putative n=1 Tax=Ricinus communis RepID=B9SC04_RICCO 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene145106 SustainPine v3.0 319
• AutoFact: Ribosomal protein L39e, putative n=1 Tax=Ricinus communis RepID=B9SC04_RICCO 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene165697 SustainPine v3.0 313
• AutoFact: ribosomal protein L39 [Magnaporthe oryzae 70-15] ref|XP_001542836.1| ribosomal protein L39 [Ajellomyces capsulatus NAm1] ref|XP_003230906.1| ribosomal L39 protein [Trichophyton rubrum CBS 118892] gb|EDJ95441.1| ribosomal protein L39 [Magnaporthe oryzae 70 6.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L39 0.0
Complete
sp_v3.0_unigene189931 SustainPine v3.0 258
• AutoFact: Predicted protein n=1 Tax=Hordeum vulgare subsp. vulgare RepID=F2EE64_HORVD 4.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L39 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain