Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RPT4A regulatory particle triple-A ATPase 4A chr5:17248563-17251014 REVERSE LENGTH=399

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene189 SustainPine v3.0 2251
• AutoFact: 26S protease regulatory subunit 10B homolog A n=2 Tax=Arabidopsis RepID=PS10A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene40350 SustainPine v3.0 690
• AutoFact: 26S protease regulatory subunit 10B homolog A n=2 Tax=Arabidopsis RepID=PS10A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasomal ATPase 5.335e-08
N-terminus
sp_v3.0_unigene75454 SustainPine v3.0 158
• AutoFact: 26S proteasome regulatory complex, ATPase RPT4 n=3 Tax=Agaricales RepID=B0CU44_LACBS 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasomal ATPase 2.463e-13
Internal
sp_v3.0_unigene152823 SustainPine v3.0 412
• AutoFact: 26S protease regulatory subunit 10B n=1 Tax=Ascaris suum RepID=F1KYD0_ASCSU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasomal ATPase 4.546e-14
Internal
sp_v3.0_unigene153109 SustainPine v3.0 446
• AutoFact: 26S protease regulatory subunit S10B n=1 Tax=Phytophthora infestans T30-4 RepID=D0MQ98_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasomal ATPase 7.001e-14
Putative C-terminus
sp_v3.0_unigene158751 SustainPine v3.0 336
• AutoFact: PREDICTED: similar to Psmc6 protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E490DB 5.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 26S proteasome AAA-ATPase subunit RPT4a 2.505e-08
C-terminus
sp_v3.0_unigene200968 SustainPine v3.0 291
• AutoFact: AAA-type ATPase family protein n=1 Tax=Arabidopsis thaliana RepID=B3H533_ARATH 7.00649e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proteasomal ATPase 5.335e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain