Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: ATEXPA1, EXP1, AT-EXP1, ATEXP1, ATHEXP ALPHA 1.2, EXPA1 expansin A1 chr1:26142034-26143200 FORWARD LENGTH=275

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene16699 SustainPine v3.0 1110
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene51828 SustainPine v3.0 237
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 8.0e-17
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene57550 SustainPine v3.0 390
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 1.0e-24
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
N-terminus
sp_v3.0_unigene60920 SustainPine v3.0 245
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Internal
sp_v3.0_unigene61945 SustainPine v3.0 297
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
Internal
sp_v3.0_unigene64684 SustainPine v3.0 153
AutoFact: Alpha-expansin n=1 Tax=Gossypium hirsutum RepID=Q8LKJ8_GOSHI 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Putative C-terminus
sp_v3.0_unigene127940 SustainPine v3.0 742
AutoFact: Expansin n=2 Tax=Sapindaceae RepID=A4GWU5_LITCN 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene140947 SustainPine v3.0 1370
AutoFact: Expansin n=2 Tax=Sapindaceae RepID=A4GWU5_LITCN 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
Putative Complete
sp_v3.0_unigene142365 SustainPine v3.0 469
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Expansin 0.0
C-terminus
sp_v3.0_unigene186369 SustainPine v3.0 382
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Sma3: Expansin 0.0
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain