Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: SMC3 structural maintenance of chromosome 3 chr5:19701908-19709091 FORWARD LENGTH=1244

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene11164 SustainPine v3.0 1495
• AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Structural maintenance of chromosomes protein 4 1.736e-09
Internal
sp_v3.0_unigene12633 SustainPine v3.0 4218
• AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Structural maintenance of chromosomes protein 4 2.544e-09
Complete
sp_v3.0_unigene37484 SustainPine v3.0 716
• AutoFact: Cast multi-domain protein 2.0e-06
• FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene41207 SustainPine v3.0 367
• AutoFact: Structural maintenance of chromosomes protein 4 n=2 Tax=Arabidopsis thaliana RepID=SMC4_ARATH 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Structural maintenance of chromosomes protein 4 2.304e-09
C-terminus
sp_v3.0_unigene52594 SustainPine v3.0 231
• AutoFact: Unassigned protein
• FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene57206 SustainPine v3.0 185
• AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 2.0e-22
• FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Structural maintenance of chromosomes protein 4 2.848e-09
Internal
sp_v3.0_unigene72476 SustainPine v3.0 284
• AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 7.0e-18
• FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene79173 SustainPine v3.0 231
• AutoFact: Structural maintenance of chromosomes protein 4 n=2 Tax=Arabidopsis thaliana RepID=SMC4_ARATH 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Structural maintenance of chromosomes protein 4 2.745e-09
Internal
sp_v3.0_unigene98805 SustainPine v3.0 473
• AutoFact: OmpH multi-domain protein 3.0e-05
• FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene128142 SustainPine v3.0 612
• AutoFact: Structural maintenance of chromosomes protein 4 n=2 Tax=Arabidopsis thaliana RepID=SMC4_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
C-terminus
sp_v3.0_unigene149117 SustainPine v3.0 237
• AutoFact: Structural maintenance of chromosomes protein 4 n=2 Tax=Arabidopsis thaliana RepID=SMC4_ARATH 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene154721 SustainPine v3.0 336
• AutoFact: Structural maintenance of chromosomes protein 4, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NXB1_PHYIT 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Structural maintenance of chromosomes protein 4 2.304e-09
Putative C-terminus
sp_v3.0_unigene161646 SustainPine v3.0 311
• AutoFact: putative SMC protein [Oryza sativa Japonica Group] gb|EEC79459.1| hypothetical protein OsI_20467 [Oryza sativa Indica Group] gb|EEE64226.1| hypothetical protein OsJ_19059 [Oryza sativa Japonica Group] 1.4013e-45
• FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Structural maintenance of chromosomes protein 4 2.694e-09
Internal
sp_v3.0_unigene162294 SustainPine v3.0 281
• AutoFact: Structural maintenance of chromosomes protein 4 n=2 Tax=Arabidopsis thaliana RepID=SMC4_ARATH 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Structural maintenance of chromosomes protein 4 2.495e-09
Internal
sp_v3.0_unigene167813 SustainPine v3.0 123
• AutoFact: Putative SMC protein (ISS) (Fragment) n=1 Tax=Ostreococcus tauri RepID=Q017K9_OSTTA 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Structural maintenance of chromosomes protein 4 2.304e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain