Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ATRABD2B, ATRAB1A, RAB1A RAB GTPase homolog 1A chr5:19167029-19168718 FORWARD LENGTH=202

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene65682 SustainPine v3.0 300
AutoFact: Rab1/RabD-family small GTPase n=7 Tax=Embryophyta RepID=A9SLS3_PHYPA 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small GTP-binding protein 6.666e-13
Internal
sp_v3.0_unigene154758 SustainPine v3.0 421
AutoFact: PREDICTED: RAB1B, member RAS oncogene family-like n=1 Tax=Rattus norvegicus RepID=UPI0001CF4217 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab18/RabC-family small GTPase 2.97e-15
N-terminus
sp_v3.0_unigene155771 SustainPine v3.0 558
AutoFact: GTP-binding protein ypt1 n=3 Tax=leotiomyceta RepID=YPT1_NEUCR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: YptC1 0.0
N-terminus
sp_v3.0_unigene156111 SustainPine v3.0 365
AutoFact: Ras-like GTP-binding protein YPT1 n=2 Tax=Phytophthora infestans RepID=YPT1_PHYIN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding protein 1.963e-18
Internal
sp_v3.0_unigene158305 SustainPine v3.0 246
AutoFact: GTP-binding protein of the rab family n=9 Tax=Saccharomycetales RepID=A3LRF3_PICST 8.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small GTP-binding protein 3.395e-11
N-terminus
sp_v3.0_unigene202344 SustainPine v3.0 407
AutoFact: Ara-5;GTP-binding protein (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q42089_ARATH 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding protein 2.694e-14
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain