Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: PGY1 Ribosomal protein L1p/L10e family chr2:11763443-11764570 REVERSE LENGTH=216

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2844 SustainPine v3.0 1344
AutoFact: Ribosomal protein n=8 Tax=Spermatophyta RepID=B7F9R7_ORYSJ 0.0
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 0.0
Complete
sp_v3.0_unigene24617 SustainPine v3.0 460
AutoFact: large subunit ribosomal protein 1 [Pristionchus sp. 13 RS5231] 6.0e-38
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 8.202e-32
N-terminus
sp_v3.0_unigene32176 SustainPine v3.0 535
AutoFact: Ribosomal protein n=1 Tax=Taenia asiatica RepID=A3F4S3_TAEAS 3.00004e-41
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 9.308e-36
C-terminus
sp_v3.0_unigene32251 SustainPine v3.0 754
AutoFact: 60S ribosomal protein L10a n=2 Tax=Salpingoeca sp. ATCC 50818 RepID=F2U9Z3_9EUKA 0.0
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 2.081e-37
Complete
sp_v3.0_unigene32842 SustainPine v3.0 1362
AutoFact: Ribosomal protein n=8 Tax=Spermatophyta RepID=B7F9R7_ORYSJ 0.0
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 0.0
Complete
sp_v3.0_unigene72041 SustainPine v3.0 323
AutoFact: 60S ribosomal protein L10a n=41 Tax=Euteleostomi RepID=RL10A_HUMAN 2.0e-38
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 4.118e-16
Putative N-terminus
sp_v3.0_unigene74408 SustainPine v3.0 261
AutoFact: PREDICTED: similar to L10a n=1 Tax=Hydra magnipapillata RepID=UPI0001927716 4.0e-19
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 2.573e-36
C-terminus
sp_v3.0_unigene74900 SustainPine v3.0 333
AutoFact: Ribosomal protein n=3 Tax=Chromadorea RepID=A8NG31_BRUMA 1.0e-23
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 6.55e-32
Putative N-terminus
sp_v3.0_unigene77025 SustainPine v3.0 201
AutoFact: Chain A, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZR|A Chain A, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tra 4.0e-16
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 5.82e-30
Internal
sp_v3.0_unigene119844 SustainPine v3.0 519
AutoFact: Ribosomal protein n=2 Tax=Chlorella RepID=A9XHZ2_CHLVU 0.0
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 8.709e-38
C-terminus
sp_v3.0_unigene151050 SustainPine v3.0 345
AutoFact: S60 ribosomal protein L10a n=1 Tax=Polysphondylium pallidum RepID=D3BAC7_POLPA 6.0e-30
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 3.93e-29
Putative C-terminus
sp_v3.0_unigene151324 SustainPine v3.0 264
AutoFact: PREDICTED: similar to L10a n=1 Tax=Hydra magnipapillata RepID=UPI0001927716 1.0e-19
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 1.366e-36
C-terminus
sp_v3.0_unigene154216 SustainPine v3.0 250
AutoFact: Putative 60S ribosomal protein L10a n=5 Tax=Leishmania RepID=A4HXT8_LEIIN 8.0e-30
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 7.648e-30
Putative C-terminus
sp_v3.0_unigene154912 SustainPine v3.0 252
AutoFact: PREDICTED: 60S ribosomal protein L10a-like n=1 Tax=Pongo abelii RepID=UPI0001D5E81F 1.0e-24
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 8.052e-33
C-terminus
sp_v3.0_unigene155420 SustainPine v3.0 367
AutoFact: 60S ribosomal protein L10a, putative n=1 Tax=Schistosoma mansoni RepID=C4Q8P4_SCHMA 4.0e-27
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 6.095e-33
C-terminus
sp_v3.0_unigene156074 SustainPine v3.0 313
AutoFact: 60S ribosomal protein L10a, putative n=2 Tax=Euphorbiaceae RepID=B9SCT8_RICCO 3.0e-22
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 1.231e-34
Putative N-terminus
sp_v3.0_unigene158711 SustainPine v3.0 330
AutoFact: Ribosomal protein n=1 Tax=Zea mays RepID=B4FN28_MAIZE 6.0e-28
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 1.288e-34
N-terminus
sp_v3.0_unigene158976 SustainPine v3.0 407
AutoFact: Ribosomal protein n=11 Tax=Euteleostei RepID=A9Z0M8_ONCMA 1.0e-24
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 5.829e-19
C-terminus
sp_v3.0_unigene158996 SustainPine v3.0 545
AutoFact: 60S ribosomal protein L10A n=3 Tax=Neoptera RepID=D1FPL3_CIMLE 0.0
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 7.918e-38
C-terminus
sp_v3.0_unigene186297 SustainPine v3.0 436
AutoFact: Ribosomal protein n=2 Tax=Ixodes scapularis RepID=B7P3X5_IXOSC 3.9937e-43
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L1 2.512e-38
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain