Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ACT7 actin 7 chr5:3052809-3054220 FORWARD LENGTH=377

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene77503 SustainPine v3.0 390
AutoFact: Actin (Fragment) n=30 Tax=Viridiplantae RepID=O48669_CUCSA 5.0e-35
FL-Next: tr=Actin; Larix gmelinii. 0.0
Sma3: Actin 1 2.605e-06
Internal
sp_v3.0_unigene78735 SustainPine v3.0 192
AutoFact: Actin (Fragment) n=4 Tax=Cercomonas RepID=Q963K0_9EUKA 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 0.0
Internal
sp_v3.0_unigene79629 SustainPine v3.0 311
AutoFact: Actin (Fragment) n=17 Tax=Eukaryota RepID=C5HIF6_PAUCH 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.596e-37
Internal
sp_v3.0_unigene109017 SustainPine v3.0 169
AutoFact: Actin 5 (Fragment) n=1 Tax=Cycas revoluta RepID=O23776_CYCRE 9.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 5 2.864e-08
Internal
sp_v3.0_unigene127774 SustainPine v3.0 454
AutoFact: Actin (Fragment) n=6 Tax=core eudicotyledons RepID=Q6PX70_CAPAN 7.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 2.184e-11
N-terminus
sp_v3.0_unigene133089 SustainPine v3.0 456
AutoFact: Actin (Fragment) n=4 Tax=Spermatophyta RepID=ACT_PINCO 9.80909e-45
FL-Next: tr=Uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Sma3: Actin 2.274e-22
Complete
sp_v3.0_unigene137955 SustainPine v3.0 343
AutoFact: actin 6.0e-26
FL-Next: tr=Actin; Larix gmelinii. 0.0
Sma3: Actin 2.469e-31
C-terminus
sp_v3.0_unigene138300 SustainPine v3.0 308
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 5.283e-16
Putative C-terminus
sp_v3.0_unigene143731 SustainPine v3.0 1128
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin 0.0
C-terminus
sp_v3.0_unigene145806 SustainPine v3.0 442
AutoFact: Actin-like protein (Fragment) n=6 Tax=Magnoliophyta RepID=E5L4N8_ONCHC 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin-2 1.064e-06
Internal
sp_v3.0_unigene146037 SustainPine v3.0 443
AutoFact: Actin, putative n=2 Tax=core eudicotyledons RepID=B9SXZ5_RICCO 0.0
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin-1 1.35e-09
N-terminus
sp_v3.0_unigene146177 SustainPine v3.0 389
AutoFact: Actin (Fragment) n=2 Tax=core eudicotyledons RepID=E3UU95_9ROSI 6.02558e-44
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Misassembled
sp_v3.0_unigene150365 SustainPine v3.0 354
AutoFact: Actin (Fragment) n=1 Tax=Enchytraeus japonensis RepID=B6RNM7_9ANNE 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.084e-23
C-terminus
sp_v3.0_unigene151932 SustainPine v3.0 516
AutoFact: [Z] COG5277 Actin and related proteins 5.0e-28
FL-Next: tr=Actin; Picea rubens (Red spruce) (Picea australis). 0.0
Sma3: Actin 5.067e-16
C-terminus
sp_v3.0_unigene152088 SustainPine v3.0 400
AutoFact: Actin, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LNQ3_9ALVE 4.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 1.807e-30
C-terminus
sp_v3.0_unigene152685 SustainPine v3.0 515
AutoFact: Ubiquitin/actin fusion protein 2 n=7 Tax=Eukaryota RepID=Q7XBP8_BIGNA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 6.87e-37
C-terminus
sp_v3.0_unigene153713 SustainPine v3.0 443
AutoFact: Actin-like protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0MYR6_PHYIT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin superfamily 4.275e-11
C-terminus
sp_v3.0_unigene158210 SustainPine v3.0 337
AutoFact: Actin, gamma 1 n=1 Tax=Pan troglodytes verus RepID=A5A6N1_PANTR 0.0
FL-Next: tr=Actin; Larix gmelinii. 0.0
Sma3: Actin 2.351e-19
N-terminus
sp_v3.0_unigene165389 SustainPine v3.0 170
AutoFact: Actin-2 n=10 Tax=Bilateria RepID=F1L3U5_ASCSU 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Actin 3.694e-16
Putative C-terminus
sp_v3.0_unigene189434 SustainPine v3.0 391
AutoFact: Actin, putative n=2 Tax=core eudicotyledons RepID=B9SXZ5_RICCO 3.99931e-42
FL-Next: tr=Actin 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: Actin 9.678e-17
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain