Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S8e family protein chr5:1944835-1946512 FORWARD LENGTH=260

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene16941 SustainPine v3.0 1545
AutoFact: Ribosomal protein S8e family protein [Arabidopsis thaliana] dbj|BAB08958.1| unnamed protein product [Arabidopsis thaliana] gb|AAL24082.1| unknown protein [Arabidopsis thaliana] gb|AAM45100.1| unknown protein [Arabidopsis thaliana] gb|AED91006.1| Ribosomal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene17015 SustainPine v3.0 1575
AutoFact: Ribosomal protein S8e family protein [Arabidopsis thaliana] dbj|BAB08958.1| unnamed protein product [Arabidopsis thaliana] gb|AAL24082.1| unknown protein [Arabidopsis thaliana] gb|AAM45100.1| unknown protein [Arabidopsis thaliana] gb|AED91006.1| Ribosomal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene18697 SustainPine v3.0 1506
AutoFact: Ribosomal protein S8e family protein [Arabidopsis thaliana] dbj|BAB08958.1| unnamed protein product [Arabidopsis thaliana] gb|AAL24082.1| unknown protein [Arabidopsis thaliana] gb|AAM45100.1| unknown protein [Arabidopsis thaliana] gb|AED91006.1| Ribosomal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene21094 SustainPine v3.0 656
AutoFact: TGF-beta inducible protein (Fragment) n=1 Tax=Platanus x acerifolia RepID=Q1M300_PLAAC 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene25678 SustainPine v3.0 413
AutoFact: TGF beta-inducible nuclear protein 1 n=1 Tax=Dictyostelium fasciculatum RepID=F4QDA1_9MYCE 0.0
FL-Next: tr=Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_5; Blastocystis hominis. 0.0
C-terminus
sp_v3.0_unigene33646 SustainPine v3.0 586
AutoFact: TGF-beta inducible protein (Fragment) n=1 Tax=Platanus x acerifolia RepID=Q1M300_PLAAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene66528 SustainPine v3.0 233
AutoFact: [J] COG2007 Ribosomal protein S8E 9.0e-09
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene126685 SustainPine v3.0 1018
AutoFact: Ribosomal protein S8e family protein [Arabidopsis thaliana] dbj|BAB08958.1| unnamed protein product [Arabidopsis thaliana] gb|AAL24082.1| unknown protein [Arabidopsis thaliana] gb|AAM45100.1| unknown protein [Arabidopsis thaliana] gb|AED91006.1| Ribosomal 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: TGF-beta inducible protein 1.354e-09
C-terminus
sp_v3.0_unigene151514 SustainPine v3.0 341
AutoFact: TGF-beta inducible protein [Platanus x acerifolia] 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
N-terminus
sp_v3.0_unigene154436 SustainPine v3.0 565
AutoFact: Ribosomal protein S8e containing protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CB679 0.0
FL-Next: tr=Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_5; Blastocystis hominis. 0.0
C-terminus
sp_v3.0_unigene154702 SustainPine v3.0 129
AutoFact: TGF-beta inducible protein (Fragment) n=1 Tax=Platanus x acerifolia RepID=Q1M300_PLAAC 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
N-terminus
sp_v3.0_unigene156949 SustainPine v3.0 240
AutoFact: Putative TGF-beta-inducible nuclear protein 1 n=1 Tax=Neospora caninum Liverpool RepID=F0VE44_NEOCA 2.0e-33
FL-Next: tr=Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_5; Blastocystis hominis. 0.0
Sma3: TGF-beta inducible protein 1.283e-09
Internal
sp_v3.0_unigene157748 SustainPine v3.0 506
AutoFact: DUF566 multi-domain protein 4.0e-07
FL-Next: tr=Ribosome biogenesis protein NSA2 putative; Albugo laibachii Nc14. 0.0
Putative N-terminus
sp_v3.0_unigene158418 SustainPine v3.0 297
AutoFact: TGF-beta inducible protein (Fragment) n=1 Tax=Platanus x acerifolia RepID=Q1M300_PLAAC 2.0e-21
FL-Next: tr=Low-CO2-inducible protein; Coccomyxa subellipsoidea C-169. 0.0
N-terminus
sp_v3.0_unigene159144 SustainPine v3.0 303
AutoFact: Ribosome biogenesis protein NSA2 n=2 Tax=Oomycetes RepID=D0MUX0_PHYIT 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Ectocarpus siliculosus (Brown alga). 0.0
Sma3: Ribosomal protein S8e 5.361e-06
N-terminus
sp_v3.0_unigene159199 SustainPine v3.0 416
AutoFact: TGF beta-inducible nuclear protein 1 n=1 Tax=Dictyostelium fasciculatum RepID=F4QDA1_9MYCE 0.0
FL-Next: tr=Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_5; Blastocystis hominis. 0.0
Sma3: Predicted protein 0.0
C-terminus
sp_v3.0_unigene166930 SustainPine v3.0 492
AutoFact: Ribosome biogenesis protein NSA2 n=4 Tax=Pleosporineae RepID=NSA2_PHANO 8.40779e-45
FL-Next: tr=Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_5; Blastocystis hominis. 0.0
C-terminus
sp_v3.0_unigene189297 SustainPine v3.0 1500
AutoFact: Ribosomal protein S8e family protein [Arabidopsis thaliana] dbj|BAB08958.1| unnamed protein product [Arabidopsis thaliana] gb|AAL24082.1| unknown protein [Arabidopsis thaliana] gb|AAM45100.1| unknown protein [Arabidopsis thaliana] gb|AED91006.1| Ribosomal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TGF-beta inducible protein 1.39e-09
Complete
sp_v3.0_unigene190340 SustainPine v3.0 309
AutoFact: Ribosome biogenesis protein NSA2 homolog n=2 Tax=Dictyostelium RepID=NSA2_DICDI 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative N-terminus
sp_v3.0_unigene199835 SustainPine v3.0 349
AutoFact: [J] COG2007 Ribosomal protein S8E 3.0e-17
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain