Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RPS18C S18 ribosomal protein chr4:6173818-6174963 FORWARD LENGTH=152

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene150376 SustainPine v3.0 369
• AutoFact: PREDICTED: similar to ribosomal protein S18 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI00005875AC 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 5.787e-12
N-terminus
sp_v3.0_unigene150439 SustainPine v3.0 366
• AutoFact: 40S ribosomal protein S18 n=22 Tax=Embryophyta RepID=RS18_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 7.938e-12
C-terminus
sp_v3.0_unigene150671 SustainPine v3.0 410
• AutoFact: ribosomal protein S18 [Cherax destructor] 6.99949e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 7.938e-12
C-terminus
sp_v3.0_unigene150918 SustainPine v3.0 467
• AutoFact: PREDICTED: similar to ribosomal protein S18, partial [Strongylocentrotus purpuratus] ref|XP_784070.2| PREDICTED: similar to ribosomal protein S18, partial [Strongylocentrotus purpuratus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 7.938e-12
C-terminus
sp_v3.0_unigene150971 SustainPine v3.0 216
• AutoFact: 40S ribosomal protein S18 n=1 Tax=Trichinella spiralis RepID=E5S703_TRISP 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 5.889e-12
C-terminus
sp_v3.0_unigene152006 SustainPine v3.0 152
• AutoFact: RPS18.A-like protein n=1 Tax=Liriodendron tulipifera RepID=D9YT75_LIRTU 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 2.723e-12
N-terminus
sp_v3.0_unigene152036 SustainPine v3.0 253
• AutoFact: PREDICTED: 40S ribosomal protein S18-like isoform 1 n=1 Tax=Nomascus leucogenys RepID=UPI00020AD7D1 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 7.938e-12
Putative C-terminus
sp_v3.0_unigene152449 SustainPine v3.0 250
• AutoFact: S18 n=1 Tax=Suberites domuncula RepID=Q4KTC3_SUBDO 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 5.105e-12
Putative C-terminus
sp_v3.0_unigene152450 SustainPine v3.0 354
• AutoFact: PREDICTED: similar to ribosomal protein S18 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI00005875AC 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 7.938e-12
C-terminus
sp_v3.0_unigene152981 SustainPine v3.0 304
• AutoFact: ribosomal protein S18 [Xenopus laevis] gb|AAH68873.1| MGC82306 protein [Xenopus laevis] 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 6.749e-12
Putative C-terminus
sp_v3.0_unigene153105 SustainPine v3.0 505
• AutoFact: 40S ribosomal protein S18 n=24 Tax=Eukaryota RepID=RS18_SPOFR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Putative Complete
sp_v3.0_unigene153353 SustainPine v3.0 509
• AutoFact: Ribosomal protein S18 n=4 Tax=Arachnida RepID=A6N9R2_ORNPR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Complete
sp_v3.0_unigene153417 SustainPine v3.0 491
• AutoFact: 40S ribosomal protein S18 n=1 Tax=Microcosmus squamiger RepID=E3PQX3_9ASCI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Putative Complete
sp_v3.0_unigene153591 SustainPine v3.0 503
• AutoFact: 40S ribosomal protein S18 n=1 Tax=Chlorella variabilis RepID=E1Z823_9CHLO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S18 0.0
Putative Complete
sp_v3.0_unigene154310 SustainPine v3.0 308
• AutoFact: 40S ribosomal protein S18 n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SGX8_PARBP 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 4.92e-12
N-terminus
sp_v3.0_unigene154586 SustainPine v3.0 484
• AutoFact: 40S ribosomal protein S18 n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SGX8_PARBP 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Putative Complete
sp_v3.0_unigene155048 SustainPine v3.0 482
• AutoFact: 40S ribosomal protein S18 n=4 Tax=Protostomia RepID=RS18_AEQIR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Complete
sp_v3.0_unigene155365 SustainPine v3.0 501
• AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 7.938e-12
Putative Complete
sp_v3.0_unigene155714 SustainPine v3.0 356
• AutoFact: 40S ribosomal protein S18, putative n=4 Tax=Chromadorea RepID=A8Q9C4_BRUMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 5.686e-12
N-terminus
sp_v3.0_unigene157699 SustainPine v3.0 433
• AutoFact: Ribosomal protein rps18 (Fragment) n=1 Tax=Arenicola marina RepID=A8UEN5_AREMA 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 5.992e-12
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain