Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RPS18C S18 ribosomal protein chr4:6173818-6174963 FORWARD LENGTH=152

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene21376 SustainPine v3.0 1087
• AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene25881 SustainPine v3.0 421
• AutoFact: 40S ribosomal protein S18 n=5 Tax=Deuterostomia RepID=RS18_BRABE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
C-terminus
sp_v3.0_unigene29536 SustainPine v3.0 1087
• AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene30769 SustainPine v3.0 572
• AutoFact: Ribosomal protein S18 n=4 Tax=Arachnida RepID=A6N9R2_ORNPR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Putative Complete
sp_v3.0_unigene30959 SustainPine v3.0 563
• AutoFact: Ribosomal protein S18 n=4 Tax=Arachnida RepID=A6N9R2_ORNPR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Complete
sp_v3.0_unigene31208 SustainPine v3.0 554
• AutoFact: 40S ribosomal protein S18 [Botryotinia fuckeliana B05.10] ref|XP_001586515.1| 40S ribosomal protein S18 [Sclerotinia sclerotiorum 1980] gb|EDN21692.1| 40S ribosomal protein S18 [Botryotinia fuckeliana B05.10] gb|EDN97648.1| 40S ribosomal protein S18 [Scle 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Complete
sp_v3.0_unigene31857 SustainPine v3.0 696
• AutoFact: 40S ribosomal protein S18 n=1 Tax=Phytophthora infestans T30-4 RepID=D0MZN9_PHYIT 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Complete
sp_v3.0_unigene32515 SustainPine v3.0 571
• AutoFact: PREDICTED: 40S ribosomal protein S18-like isoform 1 n=1 Tax=Nomascus leucogenys RepID=UPI00020AD7D1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Complete
sp_v3.0_unigene32540 SustainPine v3.0 618
• AutoFact: PREDICTED: 40S ribosomal protein S18-like isoform 1 n=1 Tax=Nomascus leucogenys RepID=UPI00020AD7D1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Complete
sp_v3.0_unigene32661 SustainPine v3.0 951
• AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene32725 SustainPine v3.0 643
• AutoFact: ribosomal protein S18 [Crassostrea gigas] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Complete
sp_v3.0_unigene33192 SustainPine v3.0 520
• AutoFact: Ribosomal protein S18 n=4 Tax=Arachnida RepID=A6N9R2_ORNPR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Complete
sp_v3.0_unigene59928 SustainPine v3.0 325
• AutoFact: S18.A ribosomal protein [Arabidopsis thaliana] gb|AAL47385.1| S18.A ribosomal protein [Arabidopsis thaliana] 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 6.309e-12
Internal
sp_v3.0_unigene73830 SustainPine v3.0 323
• AutoFact: putative ribosomal protein [Capsicum annuum] 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 7.209e-12
Internal
sp_v3.0_unigene76669 SustainPine v3.0 193
• AutoFact: PREDICTED: similar to ribosomal protein S18e [Tribolium castaneum] gb|EFA04159.1| hypothetical protein TcasGA2_TC014405 [Tribolium castaneum] 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 1.95e-12
N-terminus
sp_v3.0_unigene77690 SustainPine v3.0 395
• AutoFact: 40S ribosomal protein S18 [Botryotinia fuckeliana B05.10] ref|XP_001586515.1| 40S ribosomal protein S18 [Sclerotinia sclerotiorum 1980] gb|EDN21692.1| 40S ribosomal protein S18 [Botryotinia fuckeliana B05.10] gb|EDN97648.1| 40S ribosomal protein S18 [Scle 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.45e-12
C-terminus
sp_v3.0_unigene79814 SustainPine v3.0 354
• AutoFact: 40S ribosomal protein S18 n=22 Tax=Embryophyta RepID=RS18_ARATH 8.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 5.027e-08
N-terminus
sp_v3.0_unigene140444 SustainPine v3.0 699
• AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 8.99999e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 8.064e-12
Complete
sp_v3.0_unigene145052 SustainPine v3.0 317
• AutoFact: Ribosomal protein S18-like n=1 Tax=Oryza sativa Japonica Group RepID=Q8H583_ORYSJ 9.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S18 7.209e-12
N-terminus
sp_v3.0_unigene145053 SustainPine v3.0 358
• AutoFact: 40S ribosomal protein S18 n=22 Tax=Embryophyta RepID=RS18_ARATH 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain