Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: UBQ10 polyubiquitin 10 chr4:2718559-2719932 FORWARD LENGTH=457

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene147599 SustainPine v3.0 863
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Sma3: Bi-ubiquitin 1.687e-08
Putative Complete
sp_v3.0_unigene147604 SustainPine v3.0 579
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Sma3: Polyubiquitin 2.167e-10
C-terminus
sp_v3.0_unigene147611 SustainPine v3.0 406
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Sma3: Bi-ubiquitin 1.725e-08
Putative Complete
sp_v3.0_unigene147623 SustainPine v3.0 958
• AutoFact: putative polyubiquitin [Arabidopsis thaliana] 0.0
• FL-Next: tr=Ubiquitin-like protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Sma3: Polyubiquitin 9.799e-08
Complete
sp_v3.0_unigene147644 SustainPine v3.0 383
• AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Internal
sp_v3.0_unigene150493 SustainPine v3.0 203
• AutoFact: Polyubiquitin 5 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9BYC3_9EUKA 9.0e-24
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Sma3: Ubiquitin 1.963e-07
Putative C-terminus
sp_v3.0_unigene153365 SustainPine v3.0 258
• AutoFact: Ubiquitin extension protein n=1 Tax=Capsicum annuum RepID=A0MKC8_CAPAN 2.0e-13
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Putative N-terminus
sp_v3.0_unigene208166 SustainPine v3.0 123
• AutoFact: ORF MSV144 putative ubiquitin, similar to Neurospora crassa GB:U01220 n=1 Tax=Melanoplus sanguinipes entomopoxvirus RepID=Q9YVU8_MSEPV 1.0e-11
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Internal
sp_v3.0_unigene208500 SustainPine v3.0 629
• AutoFact: polyubiquitin [Pinus sylvestris] 0.0
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Sma3: Bi-ubiquitin 1.751e-08
Putative Complete
sp_v3.0_unigene210327 SustainPine v3.0 1043
• AutoFact: polyubiquitin [Pinus sylvestris] 0.0
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Sma3: Ubiquitin, putative 4.51e-07
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain