Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: UBQ1, EMB2167, ERD16, HAP4 ubiquitin extension protein 1 chr3:19505668-19506681 FORWARD LENGTH=128

Source: Ref_annotation from ATG

Species: Arabidoptis thaliana

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene4569 SustainPine v3.0 477
• AutoFact: [O] COG5272 Ubiquitin 6.0e-36
• FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Complete
sp_v3.0_unigene4700 SustainPine v3.0 344
• AutoFact: polyubiquitin [Capsicum chinense] 3.0e-36
• FL-Next: sp=Ubiquitin; Lupinus polyphyllus (Large-leaved lupin). 0.0
Complete
sp_v3.0_unigene11397 SustainPine v3.0 929
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene19133 SustainPine v3.0 991
• AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin fusion protein 0.0
Complete
sp_v3.0_unigene20037 SustainPine v3.0 470
• AutoFact: polyubiquitin [Capsicum chinense] 3.0e-36
• FL-Next: sp=Ubiquitin; Lupinus polyphyllus (Large-leaved lupin). 0.0
Complete
sp_v3.0_unigene29443 SustainPine v3.0 1064
• AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin fusion protein 0.0
Complete
sp_v3.0_unigene31303 SustainPine v3.0 456
• AutoFact: Ubiquitin n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SFI2_PARBP 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin extension protein 1/2 0.0
Complete
sp_v3.0_unigene31515 SustainPine v3.0 253
• AutoFact: Chain A, Structure Of Ubiquitin Solved By Sad Using The Lanthanide- Binding Tag 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene31533 SustainPine v3.0 449
• AutoFact: Ubiquitin n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1GNZ3_PARBA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin 5.744e-07
Putative Complete
sp_v3.0_unigene31774 SustainPine v3.0 398
• AutoFact: Ubiquitin-60S ribosomal protein L40 n=93 Tax=Eukaryota RepID=RL40_DROME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin fusion protein, putative, expressed 0.0
Putative Complete
sp_v3.0_unigene31998 SustainPine v3.0 245
• AutoFact: UBiQuitin family member isoform 1 n=1 Tax=Polysphondylium pallidum RepID=D3B469_POLPA 3.0e-21
• FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
• Sma3: Ubiquitin 5.094e-07
Complete
sp_v3.0_unigene32366 SustainPine v3.0 859
• AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin fusion protein 0.0
Complete
sp_v3.0_unigene32591 SustainPine v3.0 489
• AutoFact: Ubiquitin-60S ribosomal protein L40 n=93 Tax=Eukaryota RepID=RL40_DROME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin fusion protein, putative, expressed 0.0
Complete
sp_v3.0_unigene33028 SustainPine v3.0 491
• AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin fusion protein, putative, expressed 0.0
Complete
sp_v3.0_unigene33074 SustainPine v3.0 491
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_36.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CU91_VITVI 3.0e-36
• FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Complete
sp_v3.0_unigene34444 SustainPine v3.0 483
• AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin 1.735e-11
C-terminus
sp_v3.0_unigene35908 SustainPine v3.0 538
• AutoFact: Ubiquitin-60S ribosomal protein L40 n=93 Tax=Eukaryota RepID=RL40_DROME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L40 0.0
Complete
sp_v3.0_unigene47993 SustainPine v3.0 976
• AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin fusion protein 0.0
Complete
sp_v3.0_unigene51533 SustainPine v3.0 473
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene51745 SustainPine v3.0 327
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain