Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Putative copia-like retrotransposon Hopscotch polyprotein n=2 Tax=Zea mays RepID=Q8W0X9_MAIZE

Source: Description from AutoFact


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene55267 SustainPine v3.0 477
AutoFact: Putative copia-like retrotransposon Hopscotch polyprotein n=2 Tax=Zea mays RepID=Q8W0X9_MAIZE 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.202e-11
Putative N-terminus
sp_v3.0_unigene63537 SustainPine v3.0 184
AutoFact: Putative copia-like retrotransposon Hopscotch polyprotein n=2 Tax=Zea mays RepID=Q8W0X9_MAIZE 6.0e-06
FL-Next: tr=Putative copia-like retrotransposon Hopscotch polyprotein; Zea mays (Maize). 0.0
Internal
sp_v3.0_unigene64732 SustainPine v3.0 185
AutoFact: Putative copia-like retrotransposon Hopscotch polyprotein n=2 Tax=Zea mays RepID=Q8W0X9_MAIZE 2.0e-11
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.54e-32
Internal
sp_v3.0_unigene77087 SustainPine v3.0 245
AutoFact: Putative copia-like retrotransposon Hopscotch polyprotein n=2 Tax=Zea mays RepID=Q8W0X9_MAIZE 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain