Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2RBR6_ORYSJ

Source: Description from AutoFact

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene64886 SustainPine v3.0 180
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2RBR6_ORYSJ 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene67063 SustainPine v3.0 289
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2RBR6_ORYSJ 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene67843 SustainPine v3.0 384
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2RBR6_ORYSJ 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
C-terminus
sp_v3.0_unigene71343 SustainPine v3.0 346
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2RBR6_ORYSJ 4.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene159980 SustainPine v3.0 357
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2RBR6_ORYSJ 2.0e-12
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Putative C-terminus
sp_v3.0_unigene163069 SustainPine v3.0 414
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2RBR6_ORYSJ 5.0e-23
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene163659 SustainPine v3.0 319
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2RBR6_ORYSJ 1.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain