Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Putative retrotransposon n=1 Tax=Arabidopsis thaliana RepID=Q9SZY0_ARATH

Source: Description from AutoFact

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene13966 SustainPine v3.0 1406
• AutoFact: Putative retrotransposon n=1 Tax=Arabidopsis thaliana RepID=Q9SZY0_ARATH 2.0e-15
• FL-Next: tr=Putative retrotransposon; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene50018 SustainPine v3.0 390
• AutoFact: Putative retrotransposon n=1 Tax=Arabidopsis thaliana RepID=Q9SZY0_ARATH 4.0e-07
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene60163 SustainPine v3.0 190
• AutoFact: Putative retrotransposon n=1 Tax=Arabidopsis thaliana RepID=Q9SZY0_ARATH 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene63746 SustainPine v3.0 251
• AutoFact: Putative retrotransposon n=1 Tax=Arabidopsis thaliana RepID=Q9SZY0_ARATH 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 5.838e-14
Internal
sp_v3.0_unigene64740 SustainPine v3.0 155
• AutoFact: Putative retrotransposon n=1 Tax=Arabidopsis thaliana RepID=Q9SZY0_ARATH 6.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene66065 SustainPine v3.0 439
• AutoFact: Putative retrotransposon n=1 Tax=Arabidopsis thaliana RepID=Q9SZY0_ARATH 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene163810 SustainPine v3.0 288
• AutoFact: Putative retrotransposon n=1 Tax=Arabidopsis thaliana RepID=Q9SZY0_ARATH 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.946e-36
Internal
sp_v3.0_unigene196557 SustainPine v3.0 215
• AutoFact: Putative retrotransposon n=1 Tax=Arabidopsis thaliana RepID=Q9SZY0_ARATH 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain