Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Retrotransposon Tto1 DNA

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene55932 SustainPine v3.0 387
AutoFact: Putative gag-pol polyprotein n=1 Tax=Fragaria x ananassa RepID=C6GFP7_FRAAN 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon Tto1 DNA 8.285e-06
Internal
sp_v3.0_unigene57125 SustainPine v3.0 432
AutoFact: GK15001 gene product from transcript GK15001-RA 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon Tto1 DNA 3.899e-06
Internal
sp_v3.0_unigene59320 SustainPine v3.0 276
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Sma3: Retrotransposon Tto1 DNA 4.873e-06
C-terminus
sp_v3.0_unigene60081 SustainPine v3.0 362
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon Tto1 DNA 3.899e-06
Internal
sp_v3.0_unigene61516 SustainPine v3.0 182
AutoFact: GK15001 gene product from transcript GK15001-RA 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon Tto1 DNA 3.899e-06
Internal
sp_v3.0_unigene61730 SustainPine v3.0 226
AutoFact: GK15001 gene product from transcript GK15001-RA 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon Tto1 DNA 7.31e-06
Internal
sp_v3.0_unigene67698 SustainPine v3.0 428
AutoFact: GK15001 gene product from transcript GK15001-RA 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon Tto1 DNA 6.335e-06
Internal
sp_v3.0_unigene68831 SustainPine v3.0 207
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q4JQ43_GINBI 1.0e-10
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon Tto1 DNA 9.26e-06
Internal
sp_v3.0_unigene101228 SustainPine v3.0 387
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon Tto1 DNA 3.899e-06
Internal
sp_v3.0_unigene113110 SustainPine v3.0 270
AutoFact: GK15001 gene product from transcript GK15001-RA 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon Tto1 DNA 8.285e-06
Internal
sp_v3.0_unigene123314 SustainPine v3.0 152
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 7.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon Tto1 DNA 3.899e-06
Internal
sp_v3.0_unigene167181 SustainPine v3.0 289
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon Tto1 DNA 3.899e-06
Internal
sp_v3.0_unigene203843 SustainPine v3.0 456
AutoFact: rve domain containing protein 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon Tto1 DNA 3.899e-06
Internal
sp_v3.0_unigene204100 SustainPine v3.0 198
AutoFact: GK15001 gene product from transcript GK15001-RA 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon Tto1 DNA 3.899e-06
Internal
sp_v3.0_unigene205978 SustainPine v3.0 382
AutoFact: Putative gag-pol polyprotein n=1 Tax=Fragaria x ananassa RepID=C6GFP7_FRAAN 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon Tto1 DNA 6.335e-06
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain