Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: 60S ribosomal protein L17-2

Source: Description from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene54172 SustainPine v3.0 197
• AutoFact: Ribosomal petrp-like protein n=2 Tax=asterids RepID=F4YF96_CAMSI 3.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 8.985e-09
N-terminus
sp_v3.0_unigene56376 SustainPine v3.0 487
• AutoFact: 60S ribosomal protein l17 n=1 Tax=Grosmannia clavigera kw1407 RepID=F0XM07_GROCL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.379e-08
N-terminus
sp_v3.0_unigene76324 SustainPine v3.0 203
• AutoFact: Putative 60S ribosomal protein RPL17 (Fragment) n=1 Tax=Flustra foliacea RepID=A9UDS6_9BILA 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 1.165e-08
Internal
sp_v3.0_unigene78234 SustainPine v3.0 352
• AutoFact: 60S ribosomal protein L17 n=5 Tax=Apocrita RepID=E2ABF3_9HYME 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.379e-08
Putative C-terminus
sp_v3.0_unigene80319 SustainPine v3.0 427
• AutoFact: Ribosomal protein L17 n=2 Tax=Branchiostoma RepID=Q6WN59_BRABE 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.13e-08
C-terminus
sp_v3.0_unigene80765 SustainPine v3.0 286
• AutoFact: Ribosomal petrp-like protein n=2 Tax=asterids RepID=F4YF96_CAMSI 6.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 1.699e-08
Putative N-terminus
sp_v3.0_unigene145010 SustainPine v3.0 389
• AutoFact: ribosomal protein L17-1 [Poa secunda] 2.0e-28
• FL-Next: sp=60S ribosomal protein L17-2; Hordeum vulgare (Barley). 0.0
• Sma3: 60S ribosomal protein L17-2 2.145e-08
C-terminus
sp_v3.0_unigene145207 SustainPine v3.0 523
• AutoFact: Ribosomal petrp-like protein n=2 Tax=asterids RepID=F4YF96_CAMSI 3.9937e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.159e-08
Misassembled
sp_v3.0_unigene150221 SustainPine v3.0 473
• AutoFact: 60S ribosomal protein L17-2 n=1 Tax=Phytophthora infestans T30-4 RepID=D0N014_PHYIT 8.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.074e-08
C-terminus
sp_v3.0_unigene150564 SustainPine v3.0 132
• AutoFact: 60S ribosomal protein L17 (Fragment) n=1 Tax=Scenedesmus obliquus RepID=E3SC74_SCEOB 8.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 1.922e-08
Internal
sp_v3.0_unigene150566 SustainPine v3.0 318
• AutoFact: Ribosomal protein L17 (Fragment) n=1 Tax=Myxine glutinosa RepID=Q86LY9_MYXGL 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.145e-08
C-terminus
sp_v3.0_unigene153298 SustainPine v3.0 288
• AutoFact: ribosomal protein [Petunia x hybrida] 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.379e-08
C-terminus
sp_v3.0_unigene155315 SustainPine v3.0 257
• AutoFact: 60S ribosomal protein L17, putative n=1 Tax=Pediculus humanus corporis RepID=E0VJH3_PEDHC 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 1.208e-08
N-terminus
sp_v3.0_unigene155437 SustainPine v3.0 152
• AutoFact: 60S ribosomal protein L17-2 [Arabidopsis thaliana] ref|XP_002887121.1| 60S ribosomal protein L17 [Arabidopsis lyrata subsp. lyrata] sp|P51413.2|RL172_ARATH RecName: Full=60S ribosomal protein L17-2 gb|AAC18792.1| Similar to ribosomal protein L17 gb|X62724 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.26e-08
Internal
sp_v3.0_unigene158074 SustainPine v3.0 349
• AutoFact: Ribosomal protein L17 n=2 Tax=Branchiostoma RepID=Q6WN59_BRABE 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 2.13e-08
N-terminus
sp_v3.0_unigene158547 SustainPine v3.0 267
• AutoFact: 60S ribosomal protein L17 n=5 Tax=Apocrita RepID=E2ABF3_9HYME 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 1.712e-08
Internal
sp_v3.0_unigene165931 SustainPine v3.0 428
• AutoFact: 60S ribosomal protein L22 n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3KXT5_PUCGT 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 1.725e-08
N-terminus
sp_v3.0_unigene204663 SustainPine v3.0 314
• AutoFact: ribosomal protein L17 [Ictalurus punctatus] gb|AAK95143.1|AF401571_1 ribosomal protein L17 [Ictalurus punctatus] 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 60S ribosomal protein L17-2 1.855e-08
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain