Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Alpha tubulin

Source: Description from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene45100 SustainPine v3.0 465
• AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 4.858e-24
Internal
sp_v3.0_unigene59358 SustainPine v3.0 263
• AutoFact: tubulin alpha-3 chain [Oryza sativa Indica Group] 4.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 2.51e-16
Internal
sp_v3.0_unigene61310 SustainPine v3.0 201
• AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Camellia sinensis RepID=Q646H4_CAMSI 5.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 5.796e-14
Internal
sp_v3.0_unigene64955 SustainPine v3.0 274
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 5.792e-27
Internal
sp_v3.0_unigene65548 SustainPine v3.0 313
• AutoFact: alpha tubulin-2A [Triticum aestivum] gb|ABD92931.1| alpha tubulin-2D [Triticum aestivum] gb|ABD92932.1| alpha tubulin-2B [Triticum aestivum] 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 2.675e-16
Internal
sp_v3.0_unigene75575 SustainPine v3.0 253
• AutoFact: Tubulin alpha-1A chain n=6 Tax=Agaricales RepID=TBAA_SCHCO 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 1.214e-35
Internal
sp_v3.0_unigene127837 SustainPine v3.0 1369
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 2.167e-13
Putative Complete
sp_v3.0_unigene137386 SustainPine v3.0 210
• AutoFact: Tubulin alpha-2 chain n=20 Tax=Magnoliophyta RepID=TBA2_ORYSJ 2.0e-15
• FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
• Sma3: Alpha tubulin 5.684e-09
N-terminus
sp_v3.0_unigene140374 SustainPine v3.0 1179
• AutoFact: alpha-tubulin [Eucalyptus grandis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 2.223e-14
Putative Complete
sp_v3.0_unigene144162 SustainPine v3.0 784
• AutoFact: Tubulin alpha chain, putative n=14 Tax=Alveolata RepID=C5K635_9ALVE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 2.088e-21
Complete
sp_v3.0_unigene144483 SustainPine v3.0 707
• AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
• FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
• Sma3: Alpha tubulin 8.085e-19
C-terminus
sp_v3.0_unigene145621 SustainPine v3.0 636
• AutoFact: PREDICTED: tubulin alpha-8 chain-like n=1 Tax=Meleagris gallopavo RepID=UPI0002034995 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 1.537e-18
Putative C-terminus
sp_v3.0_unigene146028 SustainPine v3.0 969
• AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
• FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
• Sma3: Alpha tubulin 1.2e-26
Putative C-terminus
sp_v3.0_unigene146083 SustainPine v3.0 781
• AutoFact: alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92353.1| alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92354.1| alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92355.1| alpha tubulin 1 [Pseudotsuga menziesii var. m 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 1.235e-23
C-terminus
sp_v3.0_unigene146192 SustainPine v3.0 800
• AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 5.21e-23
N-terminus
sp_v3.0_unigene146538 SustainPine v3.0 652
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-1C chain-like n=1 Tax=Macaca mulatta RepID=UPI0001D53D82 8.96831e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 6.249e-24
Putative N-terminus
sp_v3.0_unigene146568 SustainPine v3.0 488
• AutoFact: Alpha-tubulin (Fragment) n=5 Tax=core eudicotyledons RepID=Q9SQ74_GOSHI 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 3.033e-16
Putative Complete
sp_v3.0_unigene153991 SustainPine v3.0 403
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-1C chain-like n=1 Tax=Macaca mulatta RepID=UPI0001D53D82 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 4.434e-11
C-terminus
sp_v3.0_unigene159251 SustainPine v3.0 181
• AutoFact: alpha-tubulin [Trichodina nobilis] gb|ABQ65174.1| alpha-tubulin [Trichodina heterodentata] 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 1.132e-13
Internal
sp_v3.0_unigene188479 SustainPine v3.0 470
• AutoFact: Tubulin alpha-3 chain n=5 Tax=Magnoliophyta RepID=TBA3_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 4.298e-11
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain