Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S30

Source: Description from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene30941 SustainPine v3.0 447
• AutoFact: 40S ribosomal protein S30 n=1 Tax=Salpingoeca sp. ATCC 50818 RepID=F2UN50_9EUKA 3.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 3.362e-17
Complete
sp_v3.0_unigene32604 SustainPine v3.0 605
• AutoFact: Ribosomal protein rps30 n=1 Tax=Arenicola marina RepID=A8UEU5_AREMA 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 3.362e-17
Complete
sp_v3.0_unigene54255 SustainPine v3.0 292
• AutoFact: 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_200478.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_565458.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|XP_002866160.1| 40S ribosomal protein S30 [Arabidopsis lyrata subsp. l 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 2.654e-17
Putative Complete
sp_v3.0_unigene54386 SustainPine v3.0 281
• AutoFact: 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_200478.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_565458.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|XP_002866160.1| 40S ribosomal protein S30 [Arabidopsis lyrata subsp. l 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 3.362e-17
Putative Complete
sp_v3.0_unigene55875 SustainPine v3.0 311
• AutoFact: 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_200478.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_565458.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|XP_002866160.1| 40S ribosomal protein S30 [Arabidopsis lyrata subsp. l 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 3.362e-17
Putative Complete
sp_v3.0_unigene143795 SustainPine v3.0 422
• AutoFact: 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_200478.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_565458.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|XP_002866160.1| 40S ribosomal protein S30 [Arabidopsis lyrata subsp. l 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 9.011e-13
Putative Complete
sp_v3.0_unigene151926 SustainPine v3.0 380
• AutoFact: Ribosomal protein S30 n=1 Tax=Tetrahymena pyriformis RepID=D6NT86_TETPY 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 3.362e-17
Complete
sp_v3.0_unigene153650 SustainPine v3.0 197
• AutoFact: PREDICTED: ubiquitin-like protein FUBI-like n=1 Tax=Anolis carolinensis RepID=UPI0001F9A243 9.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 0.0
Putative Complete
sp_v3.0_unigene153663 SustainPine v3.0 272
• AutoFact: Ribosomal protein S30 n=2 Tax=Chlamydomonadales RepID=A8JF66_CHLRE 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 3.362e-17
Complete
sp_v3.0_unigene166177 SustainPine v3.0 184
• AutoFact: 40S ribosomal protein S30 [Neurospora crassa OR74A] gb|EAA35670.1| 40S ribosomal protein S30 [Neurospora crassa OR74A] gb|EGO51537.1| hypothetical protein NEUTE1DRAFT_118436 [Neurospora tetrasperma FGSC 2508] 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 3.362e-17
N-terminus
sp_v3.0_unigene186156 SustainPine v3.0 476
• AutoFact: ubiquitin-like protein/ribosomal protein [Phytophthora infestans T30-4] gb|AAY43412.1| ubiquitin-like protein/ribosomal protein [Phytophthora infestans] gb|EEY52907.1| ubiquitin-like protein/ribosomal protein [Phytophthora infestans T30-4] 7.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 3.362e-17
Complete
sp_v3.0_unigene191718 SustainPine v3.0 193
• AutoFact: 40S ribosomal protein S30 n=1 Tax=Dictyostelium fasciculatum RepID=F4Q9S8_9MYCE 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 3.362e-17
Putative Complete
sp_v3.0_unigene192887 SustainPine v3.0 414
• AutoFact: Ribosomal_S30 domain containing protein 6.0e-25
• Sma3: Ribosomal protein S30 3.362e-17
coding
sp_v3.0_unigene192984 SustainPine v3.0 463
• AutoFact: 40S ribosomal protein S30 n=1 Tax=Dictyostelium fasciculatum RepID=F4Q9S8_9MYCE 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 3.362e-17
Complete
sp_v3.0_unigene202867 SustainPine v3.0 486
• AutoFact: PREDICTED: similar to rCG47344 n=1 Tax=Taeniopygia guttata RepID=UPI000194E462 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 3.362e-17
Putative Complete
sp_v3.0_unigene203380 SustainPine v3.0 480
• AutoFact: Ribosomal protein S30 containing protein [Tetrahymena thermophila] pdb|2XZM|X Chain X, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 p 5.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein S30 3.362e-17
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain