Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: 40S ribosomal protein S3a

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene19581 SustainPine v3.0 198
AutoFact: 40S ribosomal protein S1 n=4 Tax=Agaricales RepID=RS3A_COPC7 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 7.492e-21
Internal
sp_v3.0_unigene21903 SustainPine v3.0 562
AutoFact: Cyc07-like protein n=1 Tax=Solanum tuberosum RepID=Q2XPW5_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 1.032e-17
Putative Complete
sp_v3.0_unigene23648 SustainPine v3.0 788
AutoFact: PREDICTED: 40S ribosomal protein S3a-like [Monodelphis domestica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 4.745e-17
C-terminus
sp_v3.0_unigene24773 SustainPine v3.0 538
AutoFact: Cyc07-like protein n=1 Tax=Solanum tuberosum RepID=Q2XPW5_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 4.891e-17
Putative Complete
sp_v3.0_unigene26482 SustainPine v3.0 888
AutoFact: PREDICTED: similar to S3Ae ribosomal protein [Tribolium castaneum] gb|EFA05373.1| hypothetical protein TcasGA2_TC015539 [Tribolium castaneum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 4.601e-17
Complete
sp_v3.0_unigene27188 SustainPine v3.0 823
AutoFact: 40S ribosomal protein S3a n=2 Tax=Chlamydomonadales RepID=RS3A_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 4.891e-17
Putative Complete
sp_v3.0_unigene27573 SustainPine v3.0 751
AutoFact: 40S ribosomal protein S3a n=2 Tax=Chlamydomonadales RepID=RS3A_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 1.5e-24
C-terminus
sp_v3.0_unigene28220 SustainPine v3.0 821
AutoFact: Ribosomal protein S3a n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C281_9EUKA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 7.054e-17
Complete
sp_v3.0_unigene31484 SustainPine v3.0 432
AutoFact: 40S ribosomal protein S3a n=2 Tax=Chlamydomonadales RepID=RS3A_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 4.601e-17
N-terminus
sp_v3.0_unigene51428 SustainPine v3.0 683
AutoFact: RecName: Full=40S ribosomal protein S3a emb|CAD56219.1| ribosomal protein S3a [Cicer arietinum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 6.292e-17
Putative N-terminus
sp_v3.0_unigene61193 SustainPine v3.0 161
AutoFact: 40S ribosomal protein S3a n=7 Tax=Oryza sativa RepID=RS3A_ORYSJ 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 2.884e-17
Internal
sp_v3.0_unigene74049 SustainPine v3.0 336
AutoFact: 40S ribosomal protein S1 n=4 Tax=Agaricales RepID=RS3A_COPC7 5.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 7.492e-21
Internal
sp_v3.0_unigene74077 SustainPine v3.0 361
AutoFact: 40S ribosomal protein S3a n=2 Tax=Chlamydomonadales RepID=RS3A_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 1.016e-20
Internal
sp_v3.0_unigene132940 SustainPine v3.0 235
AutoFact: ribosomal S3a [Musa acuminata] 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 5.872e-21
C-terminus
sp_v3.0_unigene145718 SustainPine v3.0 716
AutoFact: RecName: Full=40S ribosomal protein S3a emb|CAD56219.1| ribosomal protein S3a [Cicer arietinum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 1.5e-24
Misassembled
sp_v3.0_unigene145808 SustainPine v3.0 426
AutoFact: 40S ribosomal protein S3a (Fragment) n=1 Tax=Pseudotsuga menziesii var. menziesii RepID=Q5MEK4_PSEMZ 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 0.0
C-terminus
sp_v3.0_unigene145852 SustainPine v3.0 613
AutoFact: 40S ribosomal protein S3a-2 [Arabidopsis thaliana] sp|Q42262.3|RS3A2_ARATH RecName: Full=40S ribosomal protein S3a-2 emb|CAA04689.1| Putative S-phase-specific ribosomal protein [Arabidopsis thaliana] emb|CAA18846.1| Putative S-phase-specific ribosomal pro 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 4.672e-17
Complete
sp_v3.0_unigene145911 SustainPine v3.0 569
AutoFact: RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein cyc07 gb|ABA41527.1| cyc07 [Nicotiana tabacum] 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 9.573e-25
C-terminus
sp_v3.0_unigene150353 SustainPine v3.0 288
AutoFact: 40S ribosomal protein S3a n=2 Tax=Chlamydomonadales RepID=RS3A_CHLRE 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 3.295e-17
Putative C-terminus
sp_v3.0_unigene151728 SustainPine v3.0 212
AutoFact: 40S ribosomal protein S3a n=2 Tax=Chlamydomonadales RepID=RS3A_CHLRE 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S3a 7.221e-21
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain