Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Rna-dependent RNA polymerase

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene13534 SustainPine v3.0 471
AutoFact: RNA-dependent RNA polymerase n=2 Tax=Gossypium hirsutum RepID=B2B9K0_GOSHI 3.9937e-43
FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rna-dependent RNA polymerase 1.429e-19
Internal
sp_v3.0_unigene14086 SustainPine v3.0 654
AutoFact: RNA-dependent RNA polymerase 6 n=1 Tax=Cucumis sativus RepID=E9NWL0_CUCSA 1.0e-34
FL-Next: sp=RNA-dependent RNA polymerase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rna-dependent RNA polymerase 9.007e-09
Internal
sp_v3.0_unigene35656 SustainPine v3.0 1151
AutoFact: Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9IKW9_POPTR 0.0
FL-Next: sp=RNA-dependent RNA polymerase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rna-dependent RNA polymerase 6.658e-24
C-terminus
sp_v3.0_unigene53295 SustainPine v3.0 477
AutoFact: RNA-dependent RNA polymerase n=5 Tax=Andropogoneae RepID=Q19VG2_MAIZE 0.0
FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rna-dependent RNA polymerase 1.599e-23
Internal
sp_v3.0_unigene61302 SustainPine v3.0 281
AutoFact: RNA-dependent RNA polymerase, putative n=1 Tax=Ricinus communis RepID=B9RP51_RICCO 2.0e-31
FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Rna-dependent RNA polymerase 2.621e-08
Internal
sp_v3.0_unigene73701 SustainPine v3.0 323
AutoFact: RecName: Full=Probable RNA-dependent RNA polymerase SHL2; AltName: Full=Protein SHOOTLESS 2 dbj|BAC00725.1| putative RNA-dependent RNA polymerase [Oryza sativa Japonica Group] dbj|BAF80151.1| SHOOTLESS2 [Oryza sativa Japonica Group] 7.0e-31
FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Rna-dependent RNA polymerase 3.812e-12
Internal
sp_v3.0_unigene78646 SustainPine v3.0 213
AutoFact: RNA-dependent RNA polymerase 6 n=2 Tax=Arabidopsis RepID=RDR6_ARATH 4.0e-19
FL-Next: sp=RNA-dependent RNA polymerase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rna-dependent RNA polymerase 1.592e-08
Internal
sp_v3.0_unigene79309 SustainPine v3.0 234
AutoFact: putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana] 1.0e-17
FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Rna-dependent RNA polymerase 1.948e-08
Internal
sp_v3.0_unigene93923 SustainPine v3.0 1548
AutoFact: RNA-dependent RNA polymerase, putative n=1 Tax=Ricinus communis RepID=B9RP51_RICCO 0.0
FL-Next: sp=RNA-dependent RNA polymerase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rna-dependent RNA polymerase 9.39e-24
C-terminus
sp_v3.0_unigene93988 SustainPine v3.0 403
AutoFact: RNA-directed RNA polymerase (Fragment) n=1 Tax=Petunia x hybrida RepID=Q9ZRX3_PETHY 3.0e-39
FL-Next: sp=Probable RNA-dependent RNA polymerase 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Rna-dependent RNA polymerase 2.608e-23
Internal
sp_v3.0_unigene102123 SustainPine v3.0 1070
AutoFact: RNA-dependent RNA polymerase 6 n=2 Tax=Arabidopsis RepID=RDR6_ARATH 0.0
FL-Next: sp=RNA-dependent RNA polymerase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rna-dependent RNA polymerase 2.011e-08
C-terminus
sp_v3.0_unigene106801 SustainPine v3.0 328
AutoFact: RNA-directed RNA polymerase [Petunia x hybrida] 5.0e-32
FL-Next: sp=Probable RNA-dependent RNA polymerase 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Rna-dependent RNA polymerase 1.769e-23
Internal
sp_v3.0_unigene149296 SustainPine v3.0 190
AutoFact: RNA-dependent RNA polymerase 6 n=6 Tax=Nicotiana RepID=A9CRC9_TOBAC 3.0e-14
FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Rna-dependent RNA polymerase 3.009e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain