Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: telomeric DNA binding

Term: GO:0042162  Help

Source: GO from Sma3

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene9680 SustainPine v3.0 1516
AutoFact: ssDNA-binding transcriptional regulator [Arabidopsis thaliana] gb|AAF43941.1|AC012188_18 Contains similarity to a hypothetical protein from Arabidopsis thaliana gb|AC002521.2. EST gb|AI995686 comes from this gene gb|AAG48815.1|AF332452_1 putative DNA-bind 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein p24 2.953e-09
Complete
sp_v3.0_unigene23357 SustainPine v3.0 911
AutoFact: ssDNA-binding transcriptional regulator [Arabidopsis thaliana] gb|AAF43941.1|AC012188_18 Contains similarity to a hypothetical protein from Arabidopsis thaliana gb|AC002521.2. EST gb|AI995686 comes from this gene gb|AAG48815.1|AF332452_1 putative DNA-bind 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA-binding protein p24 3.279e-09
C-terminus
sp_v3.0_unigene24523 SustainPine v3.0 3879
AutoFact: initiator-binding protein [Zea mays] 0.0
FL-Next: sp=Telomere repeat-binding protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene66602 SustainPine v3.0 248
AutoFact: telomere binding protein [Solanum lycopersicum] 4.0e-15
FL-Next: Isoform 4 of Telomere repeat-binding protein 1 OS=Arabidopsis thaliana GN=TRP1 0.0
Sma3: MYB transcription factor 1.695e-08
Putative C-terminus
sp_v3.0_unigene144544 SustainPine v3.0 536
AutoFact: ssDNA-binding transcriptional regulator [Arabidopsis thaliana] gb|AAF43941.1|AC012188_18 Contains similarity to a hypothetical protein from Arabidopsis thaliana gb|AC002521.2. EST gb|AI995686 comes from this gene gb|AAG48815.1|AF332452_1 putative DNA-bind 8.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain