Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tRNA wobble uridine modification

Term: GO:0002098  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene9315 SustainPine v3.0 1723
AutoFact: Glucose-inhibited division family A protein n=2 Tax=Arabidopsis RepID=Q9SHS2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Glucose inhibited division protein A, putative 2.121e-09
C-terminus
sp_v3.0_unigene35603 SustainPine v3.0 1247
AutoFact: glucose-inhibited division A family protein [Musa balbisiana] 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ER6 protein 8.081e-09
Complete
sp_v3.0_unigene46591 SustainPine v3.0 352
AutoFact: Glucose inhibited division protein A, putative n=1 Tax=Ricinus communis RepID=B9RRF2_RICCO 9.0e-13
FL-Next: tr=Glucose inhibited division protein A, putative; Ricinus communis (Castor bean). 0.0
N-terminus
sp_v3.0_unigene48031 SustainPine v3.0 328
AutoFact: Glucose inhibited division protein A, putative n=1 Tax=Ricinus communis RepID=B9RRF2_RICCO 2.8026e-45
FL-Next: tr=Glucose inhibited division protein A, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene48612 SustainPine v3.0 123
AutoFact: glucose-inhibited division A family protein [Musa acuminata] 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene67961 SustainPine v3.0 255
AutoFact: Ribulose-phosphate 3-epimerase n=1 Tax=Ricinus communis RepID=B9RLW1_RICCO 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentose-5-phosphate 3-epimerase 2.497e-16
C-terminus
sp_v3.0_unigene75567 SustainPine v3.0 181
AutoFact: Ribulose-phosphate 3-epimerase, chloroplastic n=7 Tax=Poaceae RepID=RPE_ORYSJ 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribulose-phosphate 3-epimerase 9.315e-12
Internal
sp_v3.0_unigene80365 SustainPine v3.0 146
AutoFact: glucose-inhibited division family A protein [Arabidopsis thaliana] gb|AAD28643.1| similar to glucose inhibited division protein A from prokaryotes [Arabidopsis thaliana] gb|AEC06233.1| glucose-inhibited division family A protein [Arabidopsis thaliana] 1.0e-05
FL-Next: tr=Glucose inhibited division protein A, putative; Ricinus communis (Castor bean). 0.0
Internal
sp_v3.0_unigene94691 SustainPine v3.0 493
AutoFact: Glucose inhibited division protein A, putative n=1 Tax=Ricinus communis RepID=B9RRF2_RICCO 6.0e-35
FL-Next: tr=Glucose inhibited division protein A, putative; Ricinus communis (Castor bean). 0.0
N-terminus
sp_v3.0_unigene106051 SustainPine v3.0 203
AutoFact: glucose-inhibited division A family protein [Musa acuminata] 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene130363 SustainPine v3.0 297
AutoFact: RecName: Full=Ribulose-phosphate 3-epimerase, chloroplastic; AltName: Full=Pentose-5-phosphate 3-epimerase; Short=PPE; AltName: Full=R5P3E; Short=RPE; Flags: Precursor emb|CAA90426.1| pentose-5-phosphate-3-epimerase [Solanum tuberosum] 7.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentose-5-phosphate 3-epimerase 2.675e-16
Putative C-terminus
sp_v3.0_unigene134991 SustainPine v3.0 309
AutoFact: D-ribulose-5-phosphate-3-epimerase n=2 Tax=Arabidopsis RepID=Q9SAU2_ARATH 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentose-5-phosphate 3-epimerase 3.06e-16
Internal
sp_v3.0_unigene141253 SustainPine v3.0 417
AutoFact: Ribulose-phosphate 3-epimerase, chloroplastic n=1 Tax=Spinacia oleracea RepID=RPE_SPIOL 5.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentose-5-phosphate 3-epimerase 2.497e-16
C-terminus
sp_v3.0_unigene151761 SustainPine v3.0 243
AutoFact: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Flavobacterium johnsoniae UW101 RepID=MNMG_FLAJ1 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Ectocarpus siliculosus (Brown alga). 0.0
Internal
sp_v3.0_unigene187255 SustainPine v3.0 488
AutoFact: Glucose inhibited division protein A, putative n=1 Tax=Ricinus communis RepID=B9RRF2_RICCO 1.0e-20
FL-Next: tr=Glucose inhibited division protein A, putative; Ricinus communis (Castor bean). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain