Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: endoplasmic reticulum-Golgi intermediate compartment membrane

Term: GO:0033116  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene156349 SustainPine v3.0 350
AutoFact: RAB4B, member RAS oncogene family [Mus musculus] 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small GTP-binding protein 4.915e-19
Putative N-terminus
sp_v3.0_unigene157150 SustainPine v3.0 485
AutoFact: PREDICTED: ras-related protein Rab-2A-like n=1 Tax=Acyrthosiphon pisum RepID=UPI0001791EF1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP-binding protein 1.472e-17
Putative Complete
sp_v3.0_unigene158089 SustainPine v3.0 162
AutoFact: Ras-related protein Rab-2A, putative n=5 Tax=Metazoa RepID=Q17BP4_AEDAE 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab2/RabB-family small GTPase 4.961e-11
Putative N-terminus
sp_v3.0_unigene158624 SustainPine v3.0 569
AutoFact: RAS oncogene family member RAB1 n=1 Tax=Amblyomma variegatum RepID=F0J9Z3_AMBVA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small GTP-binding protein 7.815e-20
N-terminus
sp_v3.0_unigene158646 SustainPine v3.0 326
AutoFact: Rab GTPase n=1 Tax=Polysphondylium pallidum RepID=D3BL86_POLPA 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small GTP-binding protein 1.639e-16
N-terminus
sp_v3.0_unigene158924 SustainPine v3.0 476
AutoFact: PREDICTED: ras-related protein Rab-4B-like n=1 Tax=Anolis carolinensis RepID=UPI0002039A67 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small GTP-binding protein 1.547e-24
N-terminus
sp_v3.0_unigene166321 SustainPine v3.0 413
AutoFact: Rab-type small GTP-binding protein n=3 Tax=Agaricomycetidae RepID=Q4G2I9_PAXIN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small GTP-binding protein 4.758e-17
Putative N-terminus
sp_v3.0_unigene167633 SustainPine v3.0 200
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab2/RabB-family small GTPase 9.451e-08
Putative C-terminus
sp_v3.0_unigene193129 SustainPine v3.0 398
AutoFact: RAB GTPase H1E [Arabidopsis thaliana] sp|Q9LFT9.1|RAH1E_ARATH RecName: Full=Ras-related protein RABH1e; Short=AtRABH1e emb|CAB96682.1| GTP-binding protein [Arabidopsis thaliana] gb|AED91514.1| RAB GTPase H1E [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab6/RabH-family small GTPase 5.22e-10
Internal
sp_v3.0_unigene193457 SustainPine v3.0 842
AutoFact: ras-related protein Rab-18-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001D3A15E 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab18/RabC-family small GTPase 3.776e-19
Complete
sp_v3.0_unigene193648 SustainPine v3.0 511
AutoFact: RAB2A, member RAS oncogene family n=2 Tax=Bos taurus RepID=Q148J4_BOVIN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-related protein Rab11A 6.416e-15
N-terminus
sp_v3.0_unigene201885 SustainPine v3.0 819
AutoFact: Ras-related protein Rab-18 [Arabidopsis thaliana] ref|NP_001077675.1| Ras-related protein Rab-18 [Arabidopsis thaliana] ref|NP_001117435.1| Ras-related protein Rab-18 [Arabidopsis thaliana] sp|O23657.1|RABC1_ARATH RecName: Full=Ras-related protein RABC1; 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rab18/RabC-family small GTPase 1.124e-19
Putative Complete
sp_v3.0_unigene205502 SustainPine v3.0 714
AutoFact: PREDICTED: similar to RAB18, member RAS oncogene family isoform 2 n=1 Tax=Ciona intestinalis RepID=UPI000180C875 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small GTP-binding protein 9.666e-22
Complete
sp_v3.0_unigene205555 SustainPine v3.0 575
AutoFact: GTP-binding protein o-rab1 n=1 Tax=Trichoplax adhaerens RepID=B3RKM7_TRIAD 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Small GTP-binding protein 1.372e-19
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain