Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: lysine biosynthetic process via diaminopimelate

Term: GO:0009089  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene8801 SustainPine v3.0 2008
• AutoFact: Diaminopimelate decarboxylase, putative n=1 Tax=Ricinus communis RepID=B9RH82_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Diaminopimelate decarboxylase 8.898e-12
Complete
sp_v3.0_unigene70060 SustainPine v3.0 392
• AutoFact: Probable diaminopimelate decarboxylase, chloroplastic n=3 Tax=Oryza sativa RepID=DCDA_ORYSJ 4.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene75689 SustainPine v3.0 335
• AutoFact: Diaminopimelate decarboxylase n=2 Tax=Glycine max RepID=D2DKE7_SOYBN 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene101857 SustainPine v3.0 938
• AutoFact: Transaminase mtnE, putative n=1 Tax=Ricinus communis RepID=B9S7T6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Aspartate aminotransferase, putative 9.042e-10
C-terminus
sp_v3.0_unigene133386 SustainPine v3.0 378
• AutoFact: Diaminopimelate decarboxylase 2, chloroplastic n=4 Tax=Arabidopsis RepID=DCDA2_ARATH 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Diaminopimelate decarboxylase 7.854e-08
Internal
sp_v3.0_unigene141688 SustainPine v3.0 188
• AutoFact: diaminopimelate decarboxylase 2 [Arabidopsis thaliana] sp|Q94A94.1|DCDA2_ARATH RecName: Full=Diaminopimelate decarboxylase 2, chloroplastic; Short=DAP decarboxylase 2; Flags: Precursor gb|AAK83608.1| AT5g11880/F14F18_50 [Arabidopsis thaliana] gb|AAM98306. 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Diaminopimelate decarboxylase 5.137e-08
Internal
sp_v3.0_unigene159830 SustainPine v3.0 411
• AutoFact: diaminopimelate decarboxylase 1 [Arabidopsis thaliana] sp|Q949X7.1|DCDA1_ARATH RecName: Full=Diaminopimelate decarboxylase 1, chloroplastic; Short=DAP decarboxylase 1; Flags: Precursor gb|AAL55653.1|AF227913_1 diaminopimelate decarboxylase [Arabidopsis th 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene189117 SustainPine v3.0 852
• AutoFact: diaminopimelate decarboxylase 2 [Arabidopsis thaliana] sp|Q94A94.1|DCDA2_ARATH RecName: Full=Diaminopimelate decarboxylase 2, chloroplastic; Short=DAP decarboxylase 2; Flags: Precursor gb|AAK83608.1| AT5g11880/F14F18_50 [Arabidopsis thaliana] gb|AAM98306. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Diaminopimelate decarboxylase 6.654e-12
C-terminus
sp_v3.0_unigene196983 SustainPine v3.0 272
• AutoFact: diaminopimelate decarboxylase 1 [Arabidopsis thaliana] sp|Q949X7.1|DCDA1_ARATH RecName: Full=Diaminopimelate decarboxylase 1, chloroplastic; Short=DAP decarboxylase 1; Flags: Precursor gb|AAL55653.1|AF227913_1 diaminopimelate decarboxylase [Arabidopsis th 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Diaminopimelate decarboxylase 7.729e-08
Internal
sp_v3.0_unigene208513 SustainPine v3.0 967
• AutoFact: diaminopimelate decarboxylase 2 [Arabidopsis thaliana] sp|Q94A94.1|DCDA2_ARATH RecName: Full=Diaminopimelate decarboxylase 2, chloroplastic; Short=DAP decarboxylase 2; Flags: Precursor gb|AAK83608.1| AT5g11880/F14F18_50 [Arabidopsis thaliana] gb|AAM98306. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Diaminopimelate decarboxylase 9.315e-12
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain