Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: reciprocal meiotic recombination

Term: GO:0007131  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8790 SustainPine v3.0 995
AutoFact: DNA mismatch repair protein -like [Oryza sativa Japonica Group] 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene9266 SustainPine v3.0 418
AutoFact: DNA mismatch repair protein -like [Oryza sativa Japonica Group] 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Putative N-terminus
sp_v3.0_unigene14458 SustainPine v3.0 608
AutoFact: Cenp-F_leu_zip multi-domain protein 6.0e-05
FL-Next: sp=Synaptonemal complex protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene24521 SustainPine v3.0 524
AutoFact: PREDICTED: similar to DNA repair protein RAD51 homolog A n=1 Tax=Hydra magnipapillata RepID=UPI0001923F2B 0.0
FL-Next: tr=RAD51-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: Meiotic recombination protein DMC1 homolog 6.709e-12
Internal
sp_v3.0_unigene34340 SustainPine v3.0 623
AutoFact: DNA topoisomerase 6 subunit A [Arabidopsis thaliana] ref|XP_002870991.1| hypothetical protein ARALYDRAFT_487058 [Arabidopsis lyrata subsp. lyrata] sp|Q9LZ03.1|TOP6A_ARATH RecName: Full=DNA topoisomerase 6 subunit A; Short=AtTOP6A; AltName: Full=Meiotic re 0.0
FL-Next: sp=DNA topoisomerase 6 subunit A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Topoisomerase 4.425e-08
C-terminus
sp_v3.0_unigene40266 SustainPine v3.0 400
AutoFact: RecA bacterial DNA recombination protein [Medicago truncatula] 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DNA repair protein radA (RadA)-like 2.399e-09
Internal
sp_v3.0_unigene49842 SustainPine v3.0 918
AutoFact: [R] COG1204 Superfamily II helicase 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene52567 SustainPine v3.0 375
AutoFact: DNA mismatch repair protein [Shewanella putrefaciens CN-32] gb|ABP76994.1| DNA mismatch repair protein MutL [Shewanella putrefaciens CN-32] 9.0e-16
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene55790 SustainPine v3.0 153
AutoFact: Meiotic crossover 1 n=2 Tax=Oryza sativa Japonica Group RepID=B6DMK2_ORYSJ 1.0e-09
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene57921 SustainPine v3.0 196
AutoFact: Sec63 domain containing protein 8.0e-11
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene67374 SustainPine v3.0 237
AutoFact: DNA repair protein radA (radA)-like [Oryza sativa Japonica Group] dbj|BAD45123.1| DNA repair protein radA (radA)-like [Oryza sativa Japonica Group] dbj|BAG91035.1| unnamed protein product [Oryza sativa Japonica Group] 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RAD51C protein 3.006e-09
Internal
sp_v3.0_unigene67971 SustainPine v3.0 206
AutoFact: DNA repair protein rad51, putative n=1 Tax=Ricinus communis RepID=B9RR28_RICCO 2.0e-18
FL-Next: tr=RAD51-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: Rad51 DNA recombinase 1 1.208e-08
Putative C-terminus
sp_v3.0_unigene68699 SustainPine v3.0 236
AutoFact: Meiotic recombination protein DMC1 homolog n=1 Tax=Glycine max RepID=DMC1_SOYBN 3.0e-20
FL-Next: tr=RAD51-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: Meiotic recombination protein DMC1 homolog 3.125e-12
C-terminus
sp_v3.0_unigene70764 SustainPine v3.0 251
AutoFact: DNA repair and recombination protein radA, putative n=1 Tax=Ricinus communis RepID=B9RDA0_RICCO 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene99949 SustainPine v3.0 877
AutoFact: RAD51 homolog [Populus nigra] 0.0
FL-Next: tr=RAD51-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: Meiotic recombination protein DMC1 homolog 7.576e-12
C-terminus
sp_v3.0_unigene104803 SustainPine v3.0 486
AutoFact: Isoform 2 of DNA repair protein XRCC2 homolog n=1 Tax=Arabidopsis thaliana RepID=Q682D3-2 1.0e-26
FL-Next: Isoform 2 of DNA repair protein XRCC2 homolog OS=Arabidopsis thaliana GN=XRCC2 0.0
N-terminus
sp_v3.0_unigene113115 SustainPine v3.0 442
AutoFact: Meiotic recombination protein SPO11-1 n=2 Tax=Arabidopsis RepID=SPO11_ARATH 0.0
FL-Next: sp=Meiotic recombination protein SPO11-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene116733 SustainPine v3.0 367
AutoFact: RecA bacterial DNA recombination protein [Medicago truncatula] 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene120619 SustainPine v3.0 330
AutoFact: mismatch repair-related protein [Cryptococcus neoformans var. neoformans JEC21] gb|AAW42965.1| mismatch repair-related protein, putative [Cryptococcus neoformans var. neoformans JEC21] 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein F8D20.30 8.285e-06
C-terminus
sp_v3.0_unigene156027 SustainPine v3.0 258
AutoFact: DNA repair protein RAD51 homolog 1 n=16 Tax=Amniota RepID=RAD51_MOUSE 1.0e-30
FL-Next: tr=RAD51-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: Meiotic recombination protein DMC1 homolog 1.491e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain