Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: carotenoid biosynthetic process

Term: GO:0016117  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene8768 SustainPine v3.0 1131
• AutoFact: Putative lycopene beta cyclase n=38 Tax=Cupressaceae RepID=Q403Q1_TAXDI 0.0
• FL-Next: tr=Putative lycopene beta cyclase; Taxodium distichum var. imbricarium. 0.0
• Sma3: Lycopene beta-cyclase 3.302e-39
C-terminus
sp_v3.0_unigene9642 SustainPine v3.0 1202
• AutoFact: Geranyl diphosphate synthase n=1 Tax=Abies grandis RepID=Q8LKJ2_ABIGR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Geranylgeranyl pyrophosphate synthase 0.0
C-terminus
sp_v3.0_unigene13595 SustainPine v3.0 643
• AutoFact: FAD/NAD(P)-binding oxidoreductase family protein [Arabidopsis thaliana] emb|CAA07575.1| monooxygenase [Arabidopsis thaliana] emb|CAB37510.1| monooxygenase 2 (MO2) [Arabidopsis thaliana] emb|CAB80518.1| monooxygenase 2 (MO2) [Arabidopsis thaliana] gb|AEE86 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Monoxygenase, putative 1.982e-21
C-terminus
sp_v3.0_unigene14055 SustainPine v3.0 2192
• AutoFact: Carotenoid isomerase (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J9E9_CHLRE 0.0
• FL-Next: sp=Prolycopene isomerase, chloroplastic; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Sma3: Carotenoid isomerase 3.682e-31
C-terminus
sp_v3.0_unigene14970 SustainPine v3.0 665
• AutoFact: Monoxygenase, putative n=1 Tax=Ricinus communis RepID=B9SVQ5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Monoxygenase, putative 8.8e-21
Internal
sp_v3.0_unigene18396 SustainPine v3.0 637
• AutoFact: Geranylgeranyl diphosphate synthase n=3 Tax=Pinaceae RepID=Q8W1R9_ABIGR 0.0
• FL-Next: tr=Geranylgeranyl diphosphate synthase; Abies grandis (Grand fir). 0.0
• Sma3: Geranylgeranyl pyrophosphate synthase 0.0
N-terminus
sp_v3.0_unigene21780 SustainPine v3.0 1420
• AutoFact: Lycopene epsilon cyclase n=1 Tax=Camellia sinensis var. assamica RepID=E2IHA2_CAMSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Lycopene epsilon-cyclase 2.589e-36
C-terminus
sp_v3.0_unigene23406 SustainPine v3.0 313
• AutoFact: [HC] COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 7.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Monoxygenase, putative 1.485e-21
Internal
sp_v3.0_unigene35009 SustainPine v3.0 818
• AutoFact: FAD/NAD(P)-binding oxidoreductase family protein [Arabidopsis thaliana] emb|CAA07575.1| monooxygenase [Arabidopsis thaliana] emb|CAB37510.1| monooxygenase 2 (MO2) [Arabidopsis thaliana] emb|CAB80518.1| monooxygenase 2 (MO2) [Arabidopsis thaliana] gb|AEE86 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Monooxygenase 3.539e-17
N-terminus
sp_v3.0_unigene35065 SustainPine v3.0 654
• AutoFact: Phytoene desaturase n=1 Tax=Diospyros kaki RepID=D1LZY8_DIOKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phytoene desaturase 0.0
C-terminus
sp_v3.0_unigene37442 SustainPine v3.0 909
• AutoFact: Geranylgeranyl diphosphate synthase n=1 Tax=Ginkgo biloba RepID=Q64KQ5_GINBI 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Geranylgeranyl pyrophosphate synthase 0.0
Complete
sp_v3.0_unigene41208 SustainPine v3.0 745
• AutoFact: fused [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene51826 SustainPine v3.0 494
• AutoFact: Geranyl diphosphate synthase n=1 Tax=Abies grandis RepID=Q8LKJ2_ABIGR 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Geranylgeranyl pyrophosphate synthase 0.0
C-terminus
sp_v3.0_unigene52266 SustainPine v3.0 109
• AutoFact: Putative lycopene beta cyclase n=38 Tax=Cupressaceae RepID=Q403Q1_TAXDI 2.0e-09
• FL-Next: tr=Putative lycopene beta cyclase; Taxodium distichum (Bald cypress) (Cupressus disticha). 0.0
• Sma3: Lycopene beta-cyclase 1.363e-10
Internal
sp_v3.0_unigene57299 SustainPine v3.0 168
• AutoFact: Carotenoid isomerase, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SDN0_RICCO 1.0e-21
• FL-Next: sp=Prolycopene isomerase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Carotenoid isomerase 4.699e-13
Internal
sp_v3.0_unigene61183 SustainPine v3.0 271
• AutoFact: Putative lycopene beta cyclase n=38 Tax=Cupressaceae RepID=Q403Q1_TAXDI 2.0e-19
• FL-Next: tr=Putative lycopene beta cyclase; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Lycopene beta-cyclase 1.37e-33
Internal
sp_v3.0_unigene62028 SustainPine v3.0 229
• AutoFact: Carotenoid isomerase n=1 Tax=Chrysanthemum x morifolium RepID=Q2HXK3_CHRMO 1.0e-14
• FL-Next: sp=Prolycopene isomerase 2, chloroplastic; Oncidium hybrid cultivar (Orchid). 0.0
• Sma3: CrtISO 1.216e-12
Internal
sp_v3.0_unigene63096 SustainPine v3.0 95
• AutoFact: Unassigned protein 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene63594 SustainPine v3.0 294
• AutoFact: Phytoene desaturase (Fragment) n=1 Tax=Taxus baccata RepID=D4P4P7_TAXBA 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phytoene desaturase 0.0
Internal
sp_v3.0_unigene66398 SustainPine v3.0 477
• AutoFact: fused [Arabidopsis thaliana] 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain