Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway

Term: GO:0019288  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8355 SustainPine v3.0 1094
AutoFact: 1-deoxy-D-xylulose 5-phosphate synthase type II n=1 Tax=Picea abies RepID=A7LA02_PICAB 0.0
FL-Next: tr=1-deoxy-D-xylulose 5-phosphate synthase type II; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: 1-deoxy-D-xylulose-5-phosphate synthase 3.555e-36
C-terminus
sp_v3.0_unigene15078 SustainPine v3.0 1299
AutoFact: 1-deoxy-D-xylulose 5-phosphate synthase type II n=1 Tax=Picea abies RepID=A7LA02_PICAB 0.0
FL-Next: tr=1-deoxy-D-xylulose 5-phosphate synthase type II; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: 1-deoxy-D-xylulose-5-phosphate synthase 1.386e-36
N-terminus
sp_v3.0_unigene34978 SustainPine v3.0 574
AutoFact: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Ginkgo biloba RepID=Q0R5D7_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5.587e-13
Internal
sp_v3.0_unigene37385 SustainPine v3.0 644
AutoFact: 1-deoxy-D-xylulose 5-phosphate synthase type I n=3 Tax=Pinaceae RepID=A7LA00_PICAB 0.0
FL-Next: tr=Putative 1-D-deoxyxylulose 5-phosphate synthase type 1; Pinus densiflora (Japanese red pine). 0.0
Sma3: 1-deoxy-D-xylulose-5-phosphate synthase 6.393e-33
Putative N-terminus
sp_v3.0_unigene57718 SustainPine v3.0 334
AutoFact: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase chloroplast n=1 Tax=Volvox carteri f. nagariensis RepID=D8TLJ9_VOLCA 6.0e-28
FL-Next: tr=1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase; Taxus x media. 0.0
Sma3: Plastid lyt B-like protein (4-hydroxy-3-methylbut-2-enyl diphosphate reductase) 5.848e-06
Internal
sp_v3.0_unigene60062 SustainPine v3.0 279
AutoFact: Type 2 1-hydroxy-2-methyl-2-(E)-butenyl-4-phosphate reductase n=3 Tax=Pinaceae RepID=A9P332_PINTA 3.0e-28
FL-Next: tr=Putative 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase type 2; Pinus densiflora (Japanese red pine). 0.0
Sma3: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6.977e-12
Internal
sp_v3.0_unigene62481 SustainPine v3.0 157
AutoFact: 1-deoxy-D-xylulose 5-phosphate reductoisomerase n=3 Tax=Pinaceae RepID=C6ZG57_PINTA 1.0e-07
FL-Next: tr=1-deoxy-D-xylulose 5-phosphate reductoisomerase; Pinus taeda (Loblolly pine). 0.0
Sma3: 1-deoxy-D-xylulose-5-phosphate reductoisomerase 4.167e-24
Internal
sp_v3.0_unigene79848 SustainPine v3.0 295
AutoFact: 1-deoxy-D-xylulose 5-phosphate synthase type II n=1 Tax=Picea abies RepID=A7LA02_PICAB 5.0e-28
FL-Next: tr=1-deoxy-D-xylulose 5-phosphate synthase type II; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: 1-deoxy-D-xylulose 5-phosphate synthase 3.757e-30
Internal
sp_v3.0_unigene129256 SustainPine v3.0 350
AutoFact: Type 2 1-hydroxy-2-methyl-2-(E)-butenyl-4-phosphate reductase n=3 Tax=Pinaceae RepID=A9P332_PINTA 8.0e-37
FL-Next: sp=4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3.636e-16
Internal
sp_v3.0_unigene131470 SustainPine v3.0 424
AutoFact: 1-deoxy-D-xylulose 5-phosphate synthase type I n=3 Tax=Pinaceae RepID=A7LA00_PICAB 1.0e-18
FL-Next: tr=1-deoxy-D-xylulose 5-phosphate synthase type I; Pinus taeda (Loblolly pine). 0.0
Sma3: 1-deoxy-D-xylulose-5-phosphate synthase 1.168e-26
Internal
sp_v3.0_unigene143197 SustainPine v3.0 1113
AutoFact: 1-deoxy-D-xylulose 5-phosphate synthase type II n=3 Tax=Pinaceae RepID=A7LA01_PICAB 0.0
FL-Next: tr=Putative 1-D-deoxyxylulose 5-phosphate synthase type 2; Pinus densiflora (Japanese red pine). 0.0
Sma3: 1-deoxy-D-xylulose-5-phosphate synthase 1.254e-36
Internal
sp_v3.0_unigene144668 SustainPine v3.0 346
AutoFact: (E)-4-hydroxy-3-methyl-but-2-enyl diphosphate synthase n=1 Tax=Ginkgo biloba RepID=A9CBE3_GINBI 2.0e-26
FL-Next: Isoform 2 of 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=ISPG 0.0
Sma3: Putative chloroplast 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9.865e-17
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain