Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: methylation-dependent chromatin silencing

Term: GO:0006346  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene8261 SustainPine v3.0 339
AutoFact: DRM-type DNA-methyltransferase n=1 Tax=Elaeis guineensis RepID=B4XTT0_ELAGV 1.0e-24
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative DNA cytosine methyltransferase Zmet3 2.643e-08
C-terminus
sp_v3.0_unigene8581 SustainPine v3.0 1782
AutoFact: Domains rearranged methyltransferase n=3 Tax=Nicotiana RepID=B1GYI2_NICSY 0.0
FL-Next: tr=DNA methyltransferase; subsp. trichocarpa). 0.0
Sma3: DNA methyltransferase 4.44e-13
Complete
sp_v3.0_unigene40590 SustainPine v3.0 2676
AutoFact: DRM-type DNA-methyltransferase n=1 Tax=Elaeis guineensis RepID=B4XTT0_ELAGV 0.0
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative cytosine methyltransferase 4.17e-09
Complete
sp_v3.0_unigene41476 SustainPine v3.0 124
AutoFact: DNA (cytosine-5)-methyltransferase DRM1 [Arabidopsis thaliana] sp|Q9LXE5.2|DRM1_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase DRM1; AltName: Full=Protein DOMAINS REARRANGED METHYLASE 1 gb|AED92154.1| DNA (cytosine-5)-methyltransferase DRM1 [Arabi 9.0e-11
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA methyltransferase 5.508e-10
Internal
sp_v3.0_unigene46395 SustainPine v3.0 408
AutoFact: DRM-type DNA-methyltransferase n=1 Tax=Elaeis guineensis RepID=B4XTT0_ELAGV 1.0e-35
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA methyltransferase 3.618e-10
C-terminus
sp_v3.0_unigene51033 SustainPine v3.0 128
AutoFact: DRM-type DNA-methyltransferase n=1 Tax=Elaeis guineensis RepID=B4XTT0_ELAGV 1.0e-10
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA methyltransferase 7.291e-10
Internal
sp_v3.0_unigene61249 SustainPine v3.0 138
AutoFact: Putative DNA cytosine methyltransferase Zmet3 n=1 Tax=Oryza sativa Japonica Group RepID=Q8H7W0_ORYSJ 4.0e-13
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA methyltransferase 7.961e-10
Internal
sp_v3.0_unigene68604 SustainPine v3.0 350
AutoFact: DRM-type DNA-methyltransferase n=1 Tax=Elaeis guineensis RepID=B4XTT0_ELAGV 2.0e-31
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA methyltransferase 4.404e-10
Internal
sp_v3.0_unigene69877 SustainPine v3.0 377
AutoFact: DNA methyltransferase [Nicotiana tabacum] 3.0e-37
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative DNA cytosine methyltransferase Zmet3 3.982e-08
Internal
sp_v3.0_unigene76619 SustainPine v3.0 321
AutoFact: RAD26-like SNF2 family DNA-dependent ATPase n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D7Q2_LACBS 1.0e-24
FL-Next: tr=GAGA-binding transcriptional activator; Pinus taeda (Loblolly pine). 0.0
Sma3: SNF2 super family 3.206e-32
Putative C-terminus
sp_v3.0_unigene99800 SustainPine v3.0 559
AutoFact: DRM-type DNA-methyltransferase n=1 Tax=Elaeis guineensis RepID=B4XTT0_ELAGV 2.0e-13
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative DNA cytosine methyltransferase Zmet3 3.223e-08
C-terminus
sp_v3.0_unigene110889 SustainPine v3.0 348
AutoFact: DNA helicase INO80 complex-like 1 n=1 Tax=Arabidopsis thaliana RepID=F4J277_ARATH 0.0
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromatin remodeling complex subunit 9.252e-19
Internal
sp_v3.0_unigene117711 SustainPine v3.0 332
AutoFact: DRM-type DNA-methyltransferase n=1 Tax=Elaeis guineensis RepID=B4XTT0_ELAGV 3.0e-32
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA methyltransferase 2.793e-10
Internal
sp_v3.0_unigene126442 SustainPine v3.0 199
AutoFact: putative chromatin complex subunit A101 [Oryza sativa Japonica Group] 1.0e-15
FL-Next: sp=ATP-dependent DNA helicase DDM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SWI2/SNF2-like protein 1.041e-12
Internal
sp_v3.0_unigene129606 SustainPine v3.0 503
AutoFact: DRM-type DNA-methyltransferase n=1 Tax=Elaeis guineensis RepID=B4XTT0_ELAGV 6.02558e-44
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA methyltransferase 7.824e-10
C-terminus
sp_v3.0_unigene184011 SustainPine v3.0 564
AutoFact: Putative DNA cytosine methyltransferase Zmet3 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA methyltransferase 6.659e-10
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain