Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: chloroplast thylakoid lumen

Term: GO:0009543  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene7179 SustainPine v3.0 1526
AutoFact: protease Do-like 8 [Arabidopsis thaliana] sp|Q9LU10.1|DEGP8_ARATH RecName: Full=Protease Do-like 8, chloroplastic; Flags: Precursor dbj|BAA98101.1| unnamed protein product [Arabidopsis thaliana] gb|AAL08237.1| AT5g39830/K13H13_10 [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protease degQ, putative 8.455e-08
C-terminus
sp_v3.0_unigene14296 SustainPine v3.0 884
AutoFact: putative FKBP type peptidyl-prolyl cis-trans isomerase [Pyrus communis] gb|AAL66198.1|AF386516_1 putative FKBP type peptidyl-prolyl cis-trans isomerase [Pyrus communis] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase, FKBP-type 2.36e-06
Complete
sp_v3.0_unigene16889 SustainPine v3.0 851
AutoFact: putative protease HhoA precursor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protease degQ, putative 7.227e-08
Internal
sp_v3.0_unigene22234 SustainPine v3.0 994
AutoFact: protease Do-like 1 [Arabidopsis thaliana] sp|O22609.2|DEGP1_ARATH RecName: Full=Protease Do-like 1, chloroplastic; Flags: Precursor dbj|BAB02539.1| DegP protease precursor [Arabidopsis thaliana] gb|AAK62640.1| K16N12.18/K16N12.18 [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protease degQ, putative 5.355e-12
C-terminus
sp_v3.0_unigene25453 SustainPine v3.0 3616
AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAK96649.1| T5E21.14/T5E21.14 [Arabidopsis thaliana] gb|AAM16222.1| At1g14670/T5E21.14 [Arabidopsis thaliana] gb|AEE29200.1| putative endomembrane protein 70 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEE2 7.252e-40
Complete
sp_v3.0_unigene52321 SustainPine v3.0 514
AutoFact: protease Do-like 8 [Arabidopsis thaliana] gb|AED94481.1| protease Do-like 8 [Arabidopsis thaliana] 9.0e-18
FL-Next: sp=Protease Do-like 8, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene56728 SustainPine v3.0 386
AutoFact: Oxygen-evolving enhancer protein 2 n=1 Tax=Volvox carteri f. nagariensis RepID=D8UCK6_VOLCA 2.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEE2 1.057e-19
Internal
sp_v3.0_unigene57549 SustainPine v3.0 432
AutoFact: protease Do-like 1 [Arabidopsis thaliana] sp|O22609.2|DEGP1_ARATH RecName: Full=Protease Do-like 1, chloroplastic; Flags: Precursor dbj|BAB02539.1| DegP protease precursor [Arabidopsis thaliana] gb|AAK62640.1| K16N12.18/K16N12.18 [Arabidopsis thaliana] gb 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protease degQ, putative 9.832e-08
Internal
sp_v3.0_unigene67257 SustainPine v3.0 349
AutoFact: chloroplast oxygen-evolving enhancer protein 1 [Leymus chinensis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEE1 6.755e-40
C-terminus
sp_v3.0_unigene69481 SustainPine v3.0 197
AutoFact: putative protease HhoA precursor [Arabidopsis thaliana] 8.0e-15
FL-Next: sp=Protease Do-like 5, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene75296 SustainPine v3.0 270
AutoFact: Oxygen-evolving enhancer protein 2, chloroplastic n=1 Tax=Cucumis sativus RepID=PSBP_CUCSA 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEE2 5.852e-39
Misassembled
sp_v3.0_unigene75637 SustainPine v3.0 187
AutoFact: Oxygen-evolving enhancer protein 1, chloroplastic n=1 Tax=Fritillaria agrestis RepID=PSBO_FRIAG 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEE1 5.727e-31
Internal
sp_v3.0_unigene77452 SustainPine v3.0 317
AutoFact: Oxygen-evolving enhancer protein 1, chloroplastic n=1 Tax=Fritillaria agrestis RepID=PSBO_FRIAG 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEE1 5.659e-34
Internal
sp_v3.0_unigene81128 SustainPine v3.0 177
AutoFact: oxygen-evolving enhancer protein 1 [Oryza sativa Indica Group] 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEC 33 kDa subunit 2.385e-33
Misassembled
sp_v3.0_unigene99968 SustainPine v3.0 942
AutoFact: protease Do-like 8 [Arabidopsis thaliana] sp|Q9LU10.1|DEGP8_ARATH RecName: Full=Protease Do-like 8, chloroplastic; Flags: Precursor dbj|BAA98101.1| unnamed protein product [Arabidopsis thaliana] gb|AAL08237.1| AT5g39830/K13H13_10 [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protease degQ, putative 5.447e-08
Putative C-terminus
sp_v3.0_unigene127539 SustainPine v3.0 1101
AutoFact: Oxygen-evolving enhancer protein 2 n=1 Tax=Sequoia sempervirens RepID=E5FXB2_SEQSE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEE2 3.426e-35
Complete
sp_v3.0_unigene141393 SustainPine v3.0 287
AutoFact: Oxygen-evolving enhancer protein 1, chloroplastic n=1 Tax=Fritillaria agrestis RepID=PSBO_FRIAG 9.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEC 33 kDa subunit 7.061e-30
Internal
sp_v3.0_unigene142292 SustainPine v3.0 991
AutoFact: Oxygen-evolving enhancer protein 2 n=1 Tax=Sequoia sempervirens RepID=E5FXB2_SEQSE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEE2 5.03066e-42
Complete
sp_v3.0_unigene143508 SustainPine v3.0 292
AutoFact: Oxygen-evolving enhancer protein 2, chloroplastic n=1 Tax=Fritillaria agrestis RepID=PSBP_FRIAG 8.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEE2 1.60028e-42
Internal
sp_v3.0_unigene149672 SustainPine v3.0 322
AutoFact: Oxygen evolving enhancer protein 1 n=2 Tax=rosids RepID=F2XX49_LITCN 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: OEE1 2.817e-40
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain