Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: viral capsid

Term: GO:0019028  Help

Source: GO from Sma3

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene142580 SustainPine v3.0 870
AutoFact: protein transport SEC13-like protein [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene143612 SustainPine v3.0 455
AutoFact: Nonclathrin coat protein zeta2-COP n=1 Tax=Solanum lycopersicum RepID=Q9MAZ6_SOLLC 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nonclathrin coat protein zeta1-COP 3.93e-18
Putative Complete
sp_v3.0_unigene153140 SustainPine v3.0 406
AutoFact: nonclathrin coat protein zeta2-COP [Glycine max] 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit zeta-1 1.567e-14
Putative C-terminus
sp_v3.0_unigene153680 SustainPine v3.0 511
AutoFact: Zeta-cop, subunit of COP-I complex n=2 Tax=Chlamydomonadales RepID=A8JET7_CHLRE 4.99997e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Coatomer subunit zeta-1 1.915e-15
Putative Complete
sp_v3.0_unigene158900 SustainPine v3.0 298
AutoFact: COP-II coat subunit n=1 Tax=Chlamydomonas reinhardtii RepID=A8JD99_CHLRE 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene159676 SustainPine v3.0 507
AutoFact: Low-phosphate root 1 n=6 Tax=Arabidopsis RepID=A5X8Y8_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative spore coat protein 3.128e-16
Internal
sp_v3.0_unigene166010 SustainPine v3.0 471
AutoFact: Spore coat protein, putative n=1 Tax=Ricinus communis RepID=B9SYK0_RICCO 7.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative spore coat protein 1.692e-16
C-terminus
sp_v3.0_unigene166554 SustainPine v3.0 435
AutoFact: putative spore coat protein-like protein [Oryza sativa Japonica Group] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative spore coat protein 4.384e-21
C-terminus
sp_v3.0_unigene189545 SustainPine v3.0 531
AutoFact: Spore coat protein-like n=2 Tax=Oryza sativa Japonica Group RepID=Q5ZE07_ORYSJ 8.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene199968 SustainPine v3.0 458
AutoFact: coatomer subunit zeta-1 [Bos taurus] sp|P35604.2|COPZ1_BOVIN RecName: Full=Coatomer subunit zeta-1; AltName: Full=Zeta-1-coat protein; Short=Zeta-1 COP gb|AAX08679.1| coatomer protein complex, subunit zeta 1 [Bos taurus] gb|AAX08742.1| coatomer protein co 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene209151 SustainPine v3.0 283
AutoFact: Protein transport SEC13-like protein n=1 Tax=Solanum tuberosum RepID=Q2PYY1_SOLTU 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain