Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tRNA modification

Term: GO:0006400  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene5902 SustainPine v3.0 1857
• AutoFact: tRNA(Ile)-lysidine synthetase [Synechococcus sp. JA-3-3Ab] sp|Q2JRN8.1|TILS_SYNJA RecName: Full=tRNA(Ile)-lysidine synthase; AltName: Full=tRNA(Ile)-2-lysyl-cytidine synthase; AltName: Full=tRNA(Ile)-lysidine synthetase gb|ABD00708.1| tRNA(Ile)-lysidine s 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: tRNA(Ile)-lysidine synthase, chloroplastic 8.22e-15
Complete
sp_v3.0_unigene6775 SustainPine v3.0 1758
• AutoFact: Sulfate transporter, putative n=1 Tax=Ricinus communis RepID=B9SQC2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sulfate transporter 0.0
C-terminus
sp_v3.0_unigene7777 SustainPine v3.0 1148
• AutoFact: Sulfate/bicarbonate/oxalate exchanger and transporter sat-1 n=3 Tax=Populus RepID=B9HUR7_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sulfate transporter 0.0
C-terminus
sp_v3.0_unigene10259 SustainPine v3.0 759
• AutoFact: putative tRNA modification GTPase trmE [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Probable tRNA modification GTPase mnmE; Cyanidium caldarium. Plastid; Chloroplast. 0.0
C-terminus
sp_v3.0_unigene11426 SustainPine v3.0 1544
• AutoFact: tRNA (guanine-N(7)-)-methyltransferase n=2 Tax=Andropogoneae RepID=TRMB_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: tRNA(m7G46)-methyltransferase 6.858e-13
Complete
sp_v3.0_unigene12580 SustainPine v3.0 1354
• AutoFact: Sulfate/bicarbonate/oxalate exchanger and transporter sat-1 n=5 Tax=Populus RepID=B9H8C3_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sulfate transporter 0.0
C-terminus
sp_v3.0_unigene23135 SustainPine v3.0 1017
• AutoFact: F28K19.23 n=2 Tax=Arabidopsis thaliana RepID=Q9SGZ9_ARATH 5.0e-19
• FL-Next: tr=At1g78010; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene23229 SustainPine v3.0 986
• AutoFact: tRNA(Ile)-lysidine synthase, chloroplastic n=1 Tax=Zygnema circumcarinatum RepID=TILS_ZYGCR 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene29532 SustainPine v3.0 1097
• AutoFact: tRNA(Ile)-lysidine synthase, chloroplastic n=1 Tax=Zygnema circumcarinatum RepID=TILS_ZYGCR 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene34108 SustainPine v3.0 2019
• AutoFact: Sulfate/bicarbonate/oxalate exchanger and transporter sat-1 n=3 Tax=Populus RepID=B9HUR7_POPTR 0.0
• FL-Next: sp=Sulfate transporter 3.1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Sulfate transporter 0.0
Complete
sp_v3.0_unigene35136 SustainPine v3.0 389
• AutoFact: Sulphate transporter n=3 Tax=Astragalus RepID=D4IIA5_9FABA 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sulfate transporter 0.0
Internal
sp_v3.0_unigene43681 SustainPine v3.0 755
• AutoFact: tRNA (guanine-N-7) methyltransferase [Arabidopsis thaliana] gb|AAM67168.1| unknown [Arabidopsis thaliana] gb|AAO29957.1| putative protein [Arabidopsis thaliana] gb|AAP42724.1| At5g17660 [Arabidopsis thaliana] gb|AED92453.1| tRNA (guanine-N-7) methyltransf 2.0e-12
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Complete
sp_v3.0_unigene44477 SustainPine v3.0 432
• AutoFact: Sulfate transporter 3.1 n=4 Tax=Brassicaceae RepID=SUT31_ARATH 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sulfate transporter 0.0
Internal
sp_v3.0_unigene44481 SustainPine v3.0 323
• AutoFact: Sulfate transporter, putative n=1 Tax=Ricinus communis RepID=B9SFG4_RICCO 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sulfate transporter 0.0
Internal
sp_v3.0_unigene50834 SustainPine v3.0 277
• AutoFact: tRNA (guanine-N-7) methyltransferase [Arabidopsis thaliana] gb|AAM67168.1| unknown [Arabidopsis thaliana] gb|AAO29957.1| putative protein [Arabidopsis thaliana] gb|AAP42724.1| At5g17660 [Arabidopsis thaliana] gb|AED92453.1| tRNA (guanine-N-7) methyltransf 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene64223 SustainPine v3.0 230
• AutoFact: Phosphoglycerate kinase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TQP9_VITVI 1.0e-16
• FL-Next: sp=Phosphoglycerate kinase; Vitis vinifera (Grape). 0.0
• Sma3: Phosphoglycerate kinase 1.673e-08
Internal
sp_v3.0_unigene71677 SustainPine v3.0 312
• AutoFact: tRNA (guanine-N-7) methyltransferase [Arabidopsis thaliana] gb|AAM67168.1| unknown [Arabidopsis thaliana] gb|AAO29957.1| putative protein [Arabidopsis thaliana] gb|AAP42724.1| At5g17660 [Arabidopsis thaliana] gb|AED92453.1| tRNA (guanine-N-7) methyltransf 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene93763 SustainPine v3.0 993
• AutoFact: Sulfate transporter, putative n=1 Tax=Ricinus communis RepID=B9RTL1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sulfate transporter 8.40779e-44
C-terminus
sp_v3.0_unigene99681 SustainPine v3.0 695
• AutoFact: tRNA (guanine-N-7) methyltransferase [Arabidopsis thaliana] gb|AAM67168.1| unknown [Arabidopsis thaliana] gb|AAO29957.1| putative protein [Arabidopsis thaliana] gb|AAP42724.1| At5g17660 [Arabidopsis thaliana] gb|AED92453.1| tRNA (guanine-N-7) methyltransf 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene100393 SustainPine v3.0 797
• AutoFact: PP-loop [Anabaena variabilis ATCC 29413] gb|ABA20135.1| PP-loop [Anabaena variabilis ATCC 29413] 6.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: tRNA(Ile)-lysidine synthase, chloroplastic 5.586e-15
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain