Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nitrogen fixation

Term: GO:0009399  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene96109 SustainPine v3.0 655
AutoFact: Nodulin, putative n=1 Tax=Ricinus communis RepID=B9T8S9_RICCO 3.0e-15
FL-Next: sp=Vacuolar iron transporter homolog 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Nodulin, putative 8.289e-12
N-terminus
sp_v3.0_unigene108338 SustainPine v3.0 494
AutoFact: Glutamine synthetase n=1 Tax=Suillus bovinus RepID=GLNA_SUIBO 0.0
FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene111686 SustainPine v3.0 471
AutoFact: Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein n=23 Tax=Embryophyta RepID=CHLL_PHYPA 0.0
FL-Next: sp=Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; Cupressus sempervirens. Plastid; Chloroplast. 0.0
Sma3: Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein 4.395e-39
Internal
sp_v3.0_unigene118666 SustainPine v3.0 345
AutoFact: Glutamine synthetase n=2 Tax=Schizophyllum commune RepID=D8PPX2_SCHCM 0.0
FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamine synthetase 0.0
N-terminus
sp_v3.0_unigene119922 SustainPine v3.0 388
AutoFact: Glutamine synthetase n=2 Tax=Tuber RepID=GLNA_TUBBO 0.0
FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene126341 SustainPine v3.0 713
AutoFact: non-symbiotic hemoglobin class 1 [Citrus unshiu] 8.00141e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Non-symbiotic hemoglobin 2 2.6e-25
C-terminus
sp_v3.0_unigene144502 SustainPine v3.0 878
AutoFact: glutamine synthetase root isozyme 4 [Zea mays] sp|P38562.1|GLNA4_MAIZE RecName: Full=Glutamine synthetase root isozyme 4; AltName: Full=GS107; AltName: Full=Glutamate--ammonia ligase emb|CAA46722.1| glutamine synthetase [Zea mays] 7.0e-29
FL-Next: sp=Glutamine synthetase cytosolic isozyme; Pinus sylvestris (Scots pine). 0.0
Sma3: Glutamine synthetase 0.0
Misassembled
sp_v3.0_unigene145356 SustainPine v3.0 268
AutoFact: Glutamine synthetase cytosolic isozyme n=2 Tax=Pinaceae RepID=GLNA_PINSY 2.0e-38
FL-Next: sp=Glutamine synthetase cytosolic isozyme; Pinus sylvestris (Scots pine). 0.0
Sma3: Glutamine synthetase 0.0
Internal
sp_v3.0_unigene147656 SustainPine v3.0 999
AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 0.0
FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene147659 SustainPine v3.0 706
AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 1.0e-18
FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene147662 SustainPine v3.0 603
AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 0.0
FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene147663 SustainPine v3.0 507
AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 3.00018e-42
FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
Sma3: Glutamine synthetase 0.0
Putative N-terminus
sp_v3.0_unigene147664 SustainPine v3.0 501
AutoFact: Cytosolic glutamine synthetase (Fragment) n=1 Tax=Daucus carota RepID=O22505_DAUCA 0.0
FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene147666 SustainPine v3.0 541
AutoFact: Glutamine synthetase cytosolic isozyme 1 n=35 Tax=Spermatophyta RepID=GLNA1_VITVI 9.94922e-44
FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene150696 SustainPine v3.0 399
AutoFact: Glutamine synthetase n=2 Tax=Sclerotiniaceae RepID=A6SGX0_BOTFB 2.0e-33
FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene154604 SustainPine v3.0 411
AutoFact: Pyruvate carboxyltransferase n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FFY8_FLAJ1 0.0
FL-Next: sp=2-isopropylmalate synthase A; Solanum pennellii (Tomato) (Lycopersicon pennellii). 0.0
Sma3: 2-isopropylmalate synthase 9.373e-17
Internal
sp_v3.0_unigene160626 SustainPine v3.0 512
AutoFact: Glutamine synthetase n=4 Tax=Hypocreales RepID=GLNA_FUSSH 0.0
FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene161309 SustainPine v3.0 323
AutoFact: vacuolar iron transporter-like protein [Arabidopsis thaliana] emb|CAB83064.1| nodulin-like protein [Arabidopsis thaliana] gb|AEE77815.1| vacuolar iron transporter-like protein [Arabidopsis thaliana] 9.0e-13
FL-Next: sp=Vacuolar iron transporter homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Nodulin, putative 4.63e-12
Internal
sp_v3.0_unigene164408 SustainPine v3.0 309
AutoFact: vacuolar iron transporter-like protein [Arabidopsis thaliana] emb|CAB83064.1| nodulin-like protein [Arabidopsis thaliana] gb|AEE77815.1| vacuolar iron transporter-like protein [Arabidopsis thaliana] 4.0e-22
FL-Next: sp=Vacuolar iron transporter homolog 2; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Nodulin, putative 6.351e-12
Putative N-terminus
sp_v3.0_unigene185322 SustainPine v3.0 247
AutoFact: Nonsymbiotic hemoglobin n=1 Tax=Lotus japonicus RepID=Q3C1F3_LOTJA 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Non-symbiotic hemoglobin 2 4.556e-26
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain