Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: nitrogen fixation

Term: GO:0009399  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene5518 SustainPine v3.0 2496
AutoFact: 2-isopropylmalate synthase 2, chloroplastic n=3 Tax=Arabidopsis RepID=LEU12_ARATH 0.0
FL-Next: sp=2-isopropylmalate synthase 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: 2-isopropylmalate synthase 1.291e-16
Complete
sp_v3.0_unigene10612 SustainPine v3.0 1464
AutoFact: Glutamine synthetase cytosolic isozyme n=2 Tax=Pinaceae RepID=GLNA_PINSY 0.0
FL-Next: sp=Glutamine synthetase cytosolic isozyme; Pinus sylvestris (Scots pine). 0.0
Sma3: Glutamine synthetase 0.0
Putative Complete
sp_v3.0_unigene14277 SustainPine v3.0 1112
AutoFact: RecName: Full=2-isopropylmalate synthase B; AltName: Full=Alpha-IPM synthase B; AltName: Full=Alpha-isopropylmalate synthase B gb|AAB61599.1| 2-isopropylmalate synthase [Solanum pennellii] 0.0
FL-Next: sp=2-isopropylmalate synthase B; Solanum pennellii (Tomato) (Lycopersicon pennellii). 0.0
Sma3: 2-isopropylmalate synthase 6.572e-17
Putative Complete
sp_v3.0_unigene20594 SustainPine v3.0 1076
AutoFact: Non-symbiotic hemoglobin, putative n=1 Tax=Ricinus communis RepID=B9RZD8_RICCO 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nonsymbiotic hemoglobin 2.157e-22
Putative Complete
sp_v3.0_unigene22917 SustainPine v3.0 1376
AutoFact: Non-symbiotic hemoglobin, putative n=1 Tax=Ricinus communis RepID=B9RZD8_RICCO 0.0
FL-Next: sp=Non-symbiotic hemoglobin 1; Medicago sativa (Alfalfa). 0.0
Sma3: Non-symbiotic hemoglobin 2 3.374e-24
Complete
sp_v3.0_unigene23521 SustainPine v3.0 865
AutoFact: Nonsymbiotic hemoglobin n=1 Tax=Glycine max RepID=Q42785_SOYBN 0.0
FL-Next: sp=Non-symbiotic hemoglobin 1; Medicago sativa (Alfalfa). 0.0
Sma3: Leghemoglobin 3.67e-24
Complete
sp_v3.0_unigene25998 SustainPine v3.0 479
AutoFact: Glutamine synthetase n=4 Tax=Hypocreales RepID=GLNA_FUSSH 0.0
FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene31420 SustainPine v3.0 1221
AutoFact: vacuolar iron transporter-like protein [Arabidopsis thaliana] emb|CAB83067.1| nodulin-like protein [Arabidopsis thaliana] gb|AAQ65133.1| At3g43660 [Arabidopsis thaliana] dbj|BAD43842.1| nodulin - like protein [Arabidopsis thaliana] gb|AEE77816.1| vacuolar 0.0
FL-Next: sp=Vacuolar iron transporter homolog 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Nodulin, putative 5.951e-12
Complete
sp_v3.0_unigene44062 SustainPine v3.0 758
AutoFact: Non-symbiotic hemoglobin, putative n=1 Tax=Ricinus communis RepID=B9RZD8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Non-symbiotic hemoglobin 2 5.114e-25
Putative Complete
sp_v3.0_unigene47251 SustainPine v3.0 793
AutoFact: Putative tonoplast intrinsic protein, alpha (Alpha-TIP) n=2 Tax=Arabidopsis RepID=Q9LPU9_ARATH 9.80909e-45
FL-Next: sp=Vacuolar iron transporter homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Nodulin, putative 5.085e-12
Complete
sp_v3.0_unigene51479 SustainPine v3.0 604
AutoFact: Non-symbiotic hemoglobin, putative n=1 Tax=Ricinus communis RepID=B9RZD8_RICCO 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Non-symbiotic hemoglobin 2 1.785e-25
Putative C-terminus
sp_v3.0_unigene53034 SustainPine v3.0 265
AutoFact: non-symbiotic class 1 haemoglobin [Populus tremula x Populus tremuloides] 8.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Non-symbiotic hemoglobin 2 5.94e-26
Internal
sp_v3.0_unigene70172 SustainPine v3.0 416
AutoFact: vacuolar iron transporter-like protein [Arabidopsis thaliana] emb|CAB83064.1| nodulin-like protein [Arabidopsis thaliana] gb|AEE77815.1| vacuolar iron transporter-like protein [Arabidopsis thaliana] 6.0e-14
FL-Next: sp=Vacuolar iron transporter homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Nodulin, putative 7.811e-12
N-terminus
sp_v3.0_unigene70884 SustainPine v3.0 401
AutoFact: 2-isopropylmalate synthase n=4 Tax=cellular organisms RepID=A4XQZ1_PSEMY 0.0
FL-Next: sp=2-isopropylmalate synthase A; Solanum pennellii (Tomato) (Lycopersicon pennellii). 0.0
Internal
sp_v3.0_unigene73550 SustainPine v3.0 403
AutoFact: Glutamine synthetase nodule isozyme n=2 Tax=Pisum sativum RepID=GLNA1_PEA 1.0e-24
FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene73740 SustainPine v3.0 347
AutoFact: Glutamine synthetase n=2 Tax=Tuber RepID=GLNA_TUBBO 5.00264e-43
FL-Next: sp=Glutamine synthetase; Pinus sylvestris (Scots pine). 0.0
Sma3: Glutamine synthetase 0.0
C-terminus
sp_v3.0_unigene77970 SustainPine v3.0 298
AutoFact: Non-symbiotic hemoglobin, putative n=1 Tax=Ricinus communis RepID=B9RZD9_RICCO 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Non-symbiotic hemoglobin 2 2.84e-25
Internal
sp_v3.0_unigene78086 SustainPine v3.0 327
AutoFact: Glutamine synthetase n=1 Tax=Amanita muscaria RepID=GLNA_AMAMU 9.80909e-45
FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamine synthetase 0.0
Putative C-terminus
sp_v3.0_unigene80383 SustainPine v3.0 202
AutoFact: Glutamine synthetase n=2 Tax=Pinaceae RepID=Q9ZS52_PINSY 9.0e-15
FL-Next: sp=Glutamine synthetase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Glutamine synthetase 0.0
Misassembled
sp_v3.0_unigene80830 SustainPine v3.0 220
AutoFact: Non-symbiotic hemoglobin, putative n=1 Tax=Ricinus communis RepID=B9RZD8_RICCO 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Non-symbiotic hemoglobin, putative 1.592e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain