Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: de-etiolation

Term: GO:0009704  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4577 SustainPine v3.0 758
AutoFact: RNA binding protein [Arabidopsis thaliana] gb|AAF21211.1|AC013483_35 unknown protein [Arabidopsis thaliana] gb|AAL61923.1| unknown protein [Arabidopsis thaliana] gb|AAN65055.1| unknown protein [Arabidopsis thaliana] gb|AEE74630.1| RNA binding protein [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tab2 protein 7.852e-10
N-terminus
sp_v3.0_unigene6057 SustainPine v3.0 2091
AutoFact: Helix-loop-helix DNA-binding [Medicago truncatula] 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Helix-loop-helix DNA-binding domain containing protein, expressed 5.729e-08
Complete
sp_v3.0_unigene29985 SustainPine v3.0 2518
AutoFact: BHLH transcription factor PTF1-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6EPZ6_ORYSJ 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BHLH transcription factor GBOF-1 6.026e-10
Complete
sp_v3.0_unigene51091 SustainPine v3.0 131
AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 3.0e-07
FL-Next: sp=Transcription factor bHLH66; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: BHLH transcription factor 1.78e-20
Internal
sp_v3.0_unigene101285 SustainPine v3.0 913
AutoFact: DUF1092 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tab2 protein 8.693e-10
C-terminus
sp_v3.0_unigene106070 SustainPine v3.0 475
AutoFact: Transcription factor SPATULA n=2 Tax=Arabidopsis RepID=SPT_ARATH 9.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Helix-loop-helix DNA-binding domain containing protein, expressed 5.908e-06
N-terminus
sp_v3.0_unigene106933 SustainPine v3.0 382
AutoFact: bHLH transcription factor PTF1-like [Oryza sativa Japonica Group] 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BHLH transcription factor 1.252e-19
N-terminus
sp_v3.0_unigene164940 SustainPine v3.0 375
AutoFact: bHLH transcription factor PTF1 [Zea mays] gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays] 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: BHLH transcription factor 3.949e-20
Internal
sp_v3.0_unigene185950 SustainPine v3.0 541
AutoFact: RNA binding protein [Arabidopsis thaliana] gb|AAF21211.1|AC013483_35 unknown protein [Arabidopsis thaliana] gb|AAL61923.1| unknown protein [Arabidopsis thaliana] gb|AAN65055.1| unknown protein [Arabidopsis thaliana] gb|AEE74630.1| RNA binding protein [Ara 1.0e-25
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Sma3: Tab2 protein 5.819e-10
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain