Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: double-strand break repair via nonhomologous end joining

Term: GO:0006303  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene111611 SustainPine v3.0 668
AutoFact: DNA-dependent protein kinase subunit [Dictyostelium discoideum AX4] sp|Q54UC0.2|PRKDC_DICDI RecName: Full=DNA-dependent protein kinase catalytic subunit; Short=DNA-PK catalytic subunit; Short=DNA-PKcs gb|EAL66880.2| DNA-dependent protein kinase subunit [D 3.0e-29
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene183614 SustainPine v3.0 780
AutoFact: DNA-dependent protein kinase subunit [Dictyostelium discoideum AX4] sp|Q54UC0.2|PRKDC_DICDI RecName: Full=DNA-dependent protein kinase catalytic subunit; Short=DNA-PK catalytic subunit; Short=DNA-PKcs gb|EAL66880.2| DNA-dependent protein kinase subunit [D 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
C-terminus
sp_v3.0_unigene199377 SustainPine v3.0 536
AutoFact: KU80-like protein (Fragment) n=1 Tax=Pinus sylvestris RepID=B1PYP3_PINSY 0.0
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: KAP-2 3.314e-13
Internal
sp_v3.0_unigene200659 SustainPine v3.0 470
AutoFact: RecName: Full=ATP-dependent DNA helicase 2 subunit KU80; AltName: Full=ATP-dependent DNA helicase 2 subunit 2; AltName: Full=ATP-dependent DNA helicase II 80 kDa subunit gb|AAS01977.1| putative H-box binding protein, KAP2, with alternative splicing isofor 2.94273e-44
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
Sma3: KAP-2 3.602e-13
Internal
sp_v3.0_unigene208868 SustainPine v3.0 124
AutoFact: Ku P80 DNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RDD3_RICCO 2.0e-09
FL-Next: tr=KU80-like protein; Pinus sylvestris (Scots pine). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain