Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DEAD-box ATP-dependent RNA helicase 30

Source: Description from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene4278 SustainPine v3.0 616
• AutoFact: Helicase, C-terminal [Medicago truncatula] 7.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 30 6.509e-08
Putative C-terminus
sp_v3.0_unigene9791 SustainPine v3.0 1034
• AutoFact: putative ethylene-responsive RNA helicase [Oryza sativa Japonica Group] 5.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 30 3.81e-08
Putative C-terminus
sp_v3.0_unigene53781 SustainPine v3.0 455
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 20 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 30 2.918e-08
Putative C-terminus
sp_v3.0_unigene74760 SustainPine v3.0 326
• AutoFact: Helicase, C-terminal [Medicago truncatula] 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 30 2.032e-08
C-terminus
sp_v3.0_unigene76831 SustainPine v3.0 301
• AutoFact: RNA helicase (Dbp), putative n=2 Tax=Trichocomaceae RepID=B6QP35_PENMQ 7.00649e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 30 2.563e-08
Internal
sp_v3.0_unigene78576 SustainPine v3.0 279
• AutoFact: RecName: Full=ATP-dependent RNA helicase DBP2 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 30 2.004e-08
Internal
sp_v3.0_unigene118361 SustainPine v3.0 332
• AutoFact: RecName: Full=ATP-dependent RNA helicase DBP2 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 30 3.715e-08
Putative C-terminus
sp_v3.0_unigene127176 SustainPine v3.0 570
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 20 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 30 6.609e-08
Putative C-terminus
sp_v3.0_unigene162623 SustainPine v3.0 411
• AutoFact: DEAD-box ATP-dependent RNA helicase 20 n=3 Tax=Poaceae RepID=RH20_ORYSJ 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 30 1.687e-08
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain