Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Alpha-tubulin

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene146463 SustainPine v3.0 386
AutoFact: PREDICTED: similar to tubulin, alpha 1 n=1 Tax=Canis lupus familiaris RepID=UPI00005A03AE 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 1.109e-28
Internal
sp_v3.0_unigene146506 SustainPine v3.0 607
AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 1.736e-24
Internal
sp_v3.0_unigene146542 SustainPine v3.0 534
AutoFact: alpha-tubulin 3 [Populus tremuloides] 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 1.621e-28
N-terminus
sp_v3.0_unigene146602 SustainPine v3.0 551
AutoFact: Tubulin alpha 3 chain (Fragment) n=5 Tax=Magnoliophyta RepID=A6MZF8_ORYSI 4.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 1.086e-13
Putative Complete
sp_v3.0_unigene150101 SustainPine v3.0 216
AutoFact: Tubulin alpha-1 chain n=5 Tax=Coelomata RepID=F4WDI4_9HYME 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 3.735e-12
Putative C-terminus
sp_v3.0_unigene150142 SustainPine v3.0 438
AutoFact: Alpha tubulin (Fragment) n=1 Tax=Acanthamoeba polyphaga RepID=Q102R7_ACAPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 2.808e-20
Internal
sp_v3.0_unigene152172 SustainPine v3.0 345
AutoFact: Tubulin alpha subunit n=11 Tax=Eukaryota RepID=B1NHW5_9EUKA 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 5.289e-10
C-terminus
sp_v3.0_unigene153836 SustainPine v3.0 526
AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 7.507e-29
Putative N-terminus
sp_v3.0_unigene154165 SustainPine v3.0 525
AutoFact: Alpha tubulin (Fragment) n=2 Tax=Trypanosomatidae RepID=Q9GU32_LEIMA 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 5.237e-10
C-terminus
sp_v3.0_unigene155513 SustainPine v3.0 496
AutoFact: Alpha-tubulin n=1 Tax=Sterkiella histriomuscorum RepID=Q49I46_OXYTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 4.601e-10
C-terminus
sp_v3.0_unigene157835 SustainPine v3.0 524
AutoFact: Tubulin alpha-1A chain n=5 Tax=Eukaryota RepID=TBAD_PHYPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 1.958e-21
Internal
sp_v3.0_unigene158299 SustainPine v3.0 455
AutoFact: Tubulin alpha chain n=18 Tax=Alveolata RepID=TBA_PLAFK 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 3.645e-18
Internal
sp_v3.0_unigene159135 SustainPine v3.0 332
AutoFact: Alpha-tubulin n=1 Tax=Hymenolepis diminuta RepID=Q8T672_HYMDI 1.0e-36
FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
Sma3: Alpha-tubulin 5.181e-33
N-terminus
sp_v3.0_unigene159314 SustainPine v3.0 349
AutoFact: PREDICTED: similar to tubulin, alpha 2 isoform 2 [Strongylocentrotus purpuratus] ref|XP_001177431.1| PREDICTED: similar to tubulin, alpha 2 isoform 2 [Strongylocentrotus purpuratus] 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 3.777e-12
C-terminus
sp_v3.0_unigene162764 SustainPine v3.0 123
AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Oxyrrhis marina RepID=D2YYD2_OXYMA 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 1.446e-20
Putative C-terminus
sp_v3.0_unigene188503 SustainPine v3.0 584
AutoFact: Tubulin alpha-1 chain (Fragment) n=3 Tax=Magnoliophyta RepID=A6MZU0_ORYSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 2.206e-12
C-terminus
sp_v3.0_unigene202860 SustainPine v3.0 544
AutoFact: Alpha-tubulin n=1 Tax=Sterkiella histriomuscorum RepID=Q49I46_OXYTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 2.291e-12
C-terminus
sp_v3.0_unigene204416 SustainPine v3.0 576
AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 5.543e-19
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain