Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Alpha-tubulin

Source: Description from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene127530 SustainPine v3.0 1333
• AutoFact: Tubulin alpha-1 chain (Fragment) n=3 Tax=Magnoliophyta RepID=A6MZU0_ORYSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.282e-14
Putative Complete
sp_v3.0_unigene129238 SustainPine v3.0 419
• AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Camellia sinensis RepID=Q646H4_CAMSI 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 6.35e-10
C-terminus
sp_v3.0_unigene141689 SustainPine v3.0 512
• AutoFact: Tubulin alpha-1 chain (Fragment) n=3 Tax=Magnoliophyta RepID=A6MZU0_ORYSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 7.025e-17
C-terminus
sp_v3.0_unigene142258 SustainPine v3.0 743
• AutoFact: alpha-tubulin [Eucalyptus grandis] 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 2.563e-11
Putative Complete
sp_v3.0_unigene142280 SustainPine v3.0 1170
• AutoFact: tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana] ref|NP_197479.1| tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana] ref|XP_002871906.1| tubulin alpha-3 [Arabidopsis lyrata subsp. lyrata] ref|XP_002873963.1| tubulin alpha-3 [Arabidopsis lyrata subsp 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 2.884e-33
Putative Complete
sp_v3.0_unigene143144 SustainPine v3.0 1019
• AutoFact: alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92353.1| alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92354.1| alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92355.1| alpha tubulin 1 [Pseudotsuga menziesii var. m 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.242e-28
N-terminus
sp_v3.0_unigene143737 SustainPine v3.0 594
• AutoFact: alpha-tubulin [Eucalyptus grandis] 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.885e-10
Putative C-terminus
sp_v3.0_unigene145199 SustainPine v3.0 414
• AutoFact: PREDICTED: tubulin alpha-1C chain-like n=1 Tax=Sus scrofa RepID=UPI0001E87237 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 5.046e-26
N-terminus
sp_v3.0_unigene145290 SustainPine v3.0 844
• AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 7.864e-29
Putative Complete
sp_v3.0_unigene145700 SustainPine v3.0 1053
• AutoFact: Tubulin alpha-2 chain n=20 Tax=Magnoliophyta RepID=TBA2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 4.297e-31
N-terminus
sp_v3.0_unigene145785 SustainPine v3.0 564
• AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
• FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
• Sma3: Alpha-tubulin 1.17e-17
Internal
sp_v3.0_unigene145867 SustainPine v3.0 877
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 7.897e-20
Internal
sp_v3.0_unigene146086 SustainPine v3.0 982
• AutoFact: Tubulin alpha subunit n=11 Tax=Eukaryota RepID=B1NHW5_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 3.286e-14
Misassembled
sp_v3.0_unigene146143 SustainPine v3.0 728
• AutoFact: PREDICTED: similar to Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin isotype M-alpha-3/7) n=1 Tax=Pan troglodytes RepID=UPI0000E23559 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 4.555e-10
Putative Complete
sp_v3.0_unigene146176 SustainPine v3.0 318
• AutoFact: Tubulin alpha 3 chain (Fragment) n=5 Tax=Magnoliophyta RepID=A6MZF8_ORYSI 8.99999e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 2.449e-18
Internal
sp_v3.0_unigene146199 SustainPine v3.0 519
• AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
• FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
• Sma3: Alpha-tubulin 1.113e-21
Internal
sp_v3.0_unigene146249 SustainPine v3.0 736
• AutoFact: PREDICTED: similar to Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin isotype M-alpha-3/7) n=1 Tax=Pan troglodytes RepID=UPI0000E23559 0.0
• FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
• Sma3: Alpha-tubulin 7.347e-31
Putative N-terminus
sp_v3.0_unigene146265 SustainPine v3.0 783
• AutoFact: Alpha-tubulin-like protein n=1 Tax=Solanum tuberosum RepID=Q3HRW7_SOLTU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 2.123e-10
N-terminus
sp_v3.0_unigene146331 SustainPine v3.0 911
• AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 4.391e-17
Putative Complete
sp_v3.0_unigene146428 SustainPine v3.0 1199
• AutoFact: alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92353.1| alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92354.1| alpha tubulin 1 [Pseudotsuga menziesii var. menziesii] gb|AAV92355.1| alpha tubulin 1 [Pseudotsuga menziesii var. m 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 4.506e-31
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain