Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: mRNA transport

Term: GO:0051028  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene4067 SustainPine v3.0 3499
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 8 dbj|BAD25226.1| putative RNA helicase [Oryza sativa Japonica Group] dbj|BAG92832.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE57460.1| hypothetical protein OsJ_07688 [Oryza sativa Japon 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: eIF-4A-1 4.16e-08
Complete
sp_v3.0_unigene6338 SustainPine v3.0 2457
AutoFact: Apyrase-like protein n=1 Tax=Nicotiana tabacum RepID=A0MWC2_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Apyrase 2.644e-34
Complete
sp_v3.0_unigene23664 SustainPine v3.0 3049
AutoFact: RNA helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene25935 SustainPine v3.0 472
AutoFact: Ran binding protein 1 domain-containing protein n=1 Tax=Polysphondylium pallidum RepID=D3B1Q8_POLPA 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ran-binding protein 1 5.018e-17
Putative Complete
sp_v3.0_unigene29764 SustainPine v3.0 592
AutoFact: Ran binding protein [Nicotiana benthamiana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ran-binding protein 1 6.455e-21
Putative N-terminus
sp_v3.0_unigene75039 SustainPine v3.0 192
AutoFact: DEAD-box ATP-dependent RNA helicase 38 n=3 Tax=Oryza sativa RepID=RH38_ORYSJ 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene77713 SustainPine v3.0 482
AutoFact: Nucleoside-triphosphatase n=1 Tax=Arabidopsis thaliana RepID=F4JWK8_ARATH 4.0e-22
FL-Next: sp=Nucleoside-triphosphatase; Pisum sativum (Garden pea). 0.0
Sma3: Apyrase 6.31e-29
Internal
sp_v3.0_unigene78210 SustainPine v3.0 321
AutoFact: Putative apyrase [Oryza sativa Japonica Group] gb|ABF95735.1| Nucleoside-triphosphatase, putative, expressed [Oryza sativa Japonica Group] 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Apyrase 5.712e-35
Putative C-terminus
sp_v3.0_unigene81227 SustainPine v3.0 242
AutoFact: ATP-dependent RNA helicase dhh1 [Coprinopsis cinerea okayama7#130] gb|EAU89171.1| ATP-dependent RNA helicase dhh1 [Coprinopsis cinerea okayama7#130] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 6 9.382e-08
Putative C-terminus
sp_v3.0_unigene101263 SustainPine v3.0 783
AutoFact: DEAD-box ATP-dependent RNA helicase 38 [Arabidopsis thaliana] sp|Q93ZG7.2|RH38_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 38; AltName: Full=Low expression of osmotically-responsive genes 4 protein; AltName: Full=Protein CRYOPHYTE emb|CAB64214 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 38 9.932e-09
Putative N-terminus
sp_v3.0_unigene142905 SustainPine v3.0 314
AutoFact: Ran-binding protein 1-c [Arabidopsis thaliana] sp|P92985.1|RBP1C_ARATH RecName: Full=Ran-binding protein 1 homolog c gb|AAB38776.1| Ran binding protein 1 homolog [Arabidopsis thaliana] gb|ABD94080.1| At5g58590 [Arabidopsis thaliana] gb|AED97073.1| Ran-bin 8.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ran-binding protein 1 4.911e-21
Putative N-terminus
sp_v3.0_unigene159369 SustainPine v3.0 136
AutoFact: putative RNA helicase (ISS) [Ostreococcus tauri] emb|CAL53470.1| putative RNA helicase (ISS) [Ostreococcus tauri] 4.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: DEAD-box ATP-dependent RNA helicase 6 1.165e-08
Internal
sp_v3.0_unigene162270 SustainPine v3.0 224
AutoFact: Putative apyrase [Oryza sativa Japonica Group] gb|ABF95735.1| Nucleoside-triphosphatase, putative, expressed [Oryza sativa Japonica Group] 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Apyrase 2.377e-28
Putative C-terminus
sp_v3.0_unigene190639 SustainPine v3.0 365
AutoFact: Eukaryotic initiation factor 4A-III n=1 Tax=Caligus clemensi RepID=C1C237_9MAXI 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Dead box ATP-dependent RNA helicase, putative 9.226e-09
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain