Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA binding protein, putative

Source: Description from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene3802 SustainPine v3.0 1631
• AutoFact: Intron maturase, type II family protein [Arabidopsis thaliana] dbj|BAB10231.1| unnamed protein product [Arabidopsis thaliana] gb|AED95448.1| Intron maturase, type II family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA binding protein, putative 4.585e-06
C-terminus
sp_v3.0_unigene7912 SustainPine v3.0 1849
• AutoFact: Intron maturase, type II family protein [Arabidopsis thaliana] dbj|BAB10231.1| unnamed protein product [Arabidopsis thaliana] gb|AED95448.1| Intron maturase, type II family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA binding protein, putative 4.585e-06
C-terminus
sp_v3.0_unigene9997 SustainPine v3.0 741
• AutoFact: RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] dbj|BAB09686.1| unnamed protein product [Arabidopsis thaliana] gb|AAL32792.1| Unknown protein [Arabidopsis thaliana] gb|AAM13348.1| unknown protein [Arabidopsis thaliana] gb|AAM65119.1| 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA binding protein, putative 2.835e-08
Complete
sp_v3.0_unigene18270 SustainPine v3.0 1656
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) n=3 Tax=Vitis vinifera RepID=D7SM13_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA binding protein, putative 8.584e-06
Complete
sp_v3.0_unigene22664 SustainPine v3.0 3689
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) n=3 Tax=Vitis vinifera RepID=D7SP17_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA binding protein, putative 8.306e-06
Putative Complete
sp_v3.0_unigene22745 SustainPine v3.0 981
• AutoFact: Intron maturase, type II family protein n=2 Tax=Arabidopsis thaliana RepID=Q9FJR9_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA binding protein, putative 2.609e-06
N-terminus
sp_v3.0_unigene94040 SustainPine v3.0 1400
• AutoFact: Intron maturase, type II family protein [Arabidopsis thaliana] dbj|BAB10231.1| unnamed protein product [Arabidopsis thaliana] gb|AED95448.1| Intron maturase, type II family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA binding protein, putative 4.585e-06
C-terminus
sp_v3.0_unigene102065 SustainPine v3.0 607
• AutoFact: Intron maturase, type II family protein n=2 Tax=Arabidopsis thaliana RepID=Q9FJR9_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA binding protein, putative 6.613e-06
Internal
sp_v3.0_unigene126572 SustainPine v3.0 903
• AutoFact: Intron maturase, type II family protein [Arabidopsis thaliana] dbj|BAB10231.1| unnamed protein product [Arabidopsis thaliana] gb|AED95448.1| Intron maturase, type II family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA binding protein, putative 2.533e-06
N-terminus
sp_v3.0_unigene134896 SustainPine v3.0 270
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA binding protein, putative 4.484e-06
Internal
sp_v3.0_unigene151268 SustainPine v3.0 466
• AutoFact: Intron maturase, type II family protein [Arabidopsis thaliana] dbj|BAB10231.1| unnamed protein product [Arabidopsis thaliana] gb|AED95448.1| Intron maturase, type II family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA binding protein, putative 6.012e-06
Internal
sp_v3.0_unigene210099 SustainPine v3.0 392
• AutoFact: Intron maturase, type II family protein [Arabidopsis thaliana] dbj|BAB10231.1| unnamed protein product [Arabidopsis thaliana] gb|AED95448.1| Intron maturase, type II family protein [Arabidopsis thaliana] 7.0e-23
• FL-Next: sp=Uncharacterized mitochondrial protein ymf11; Marchantia polymorpha (Liverwort) (Marchantia aquatica). Mitochondrion. 0.0
• Sma3: RNA binding protein, putative 4.585e-06
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain