Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ubiquitin--protein ligase.

Term: EC:6.3.2.19  Help

Source: EC from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene104106 SustainPine v3.0 262
• AutoFact: Probable ubiquitin-conjugating enzyme E2 23 n=2 Tax=Arabidopsis RepID=UBC23_ARATH 5.0e-26
• FL-Next: sp=Probable ubiquitin-conjugating enzyme E2 23; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene126868 SustainPine v3.0 483
• AutoFact: Ubiquitin carrier protein n=1 Tax=Yarrowia lipolytica CLIB122 RepID=Q6C907_YARLI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Complete
sp_v3.0_unigene127411 SustainPine v3.0 867
• AutoFact: Ubiquitin carrier protein n=13 Tax=Tracheophyta RepID=Q69JN7_ORYSJ 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Putative Complete
sp_v3.0_unigene127879 SustainPine v3.0 1059
• AutoFact: Ubiquitin carrier protein n=2 Tax=Picea sitchensis RepID=B8LR70_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 8.925e-17
Complete
sp_v3.0_unigene127896 SustainPine v3.0 925
• AutoFact: Ubiquitin carrier protein n=1 Tax=Populus trichocarpa RepID=B9HDK6_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Complete
sp_v3.0_unigene128189 SustainPine v3.0 442
• AutoFact: Ubiquitin carrier protein (Fragment) n=1 Tax=Hyacinthus orientalis RepID=Q5YJR0_HYAOR 7.0e-32
• FL-Next: tr=Putative ubiquitin conjugating enzyme; Pinus resinosa (Red pine) (Norway pine). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Complete
sp_v3.0_unigene128226 SustainPine v3.0 735
• AutoFact: Ubiquitin-conjugating enzyme 13, E2 n=3 Tax=Embryophyta RepID=D8QMV8_SELML 3.9937e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.88615e-42
Complete
sp_v3.0_unigene129798 SustainPine v3.0 312
• AutoFact: Ubiquitin-conjugating enzyme E2 n=2 Tax=Pinaceae RepID=Q9ZRS7_PSEMZ 5.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 6.056e-17
C-terminus
sp_v3.0_unigene129868 SustainPine v3.0 238
• AutoFact: Probable ubiquitin-conjugating enzyme E2 n=3 Tax=Picea RepID=O65079_PICMA 1.0e-10
• FL-Next: tr=Probable ubiquitin-conjugating enzyme E2; Picea mariana (Black spruce) (Abies mariana). 0.0
Misassembled
sp_v3.0_unigene133302 SustainPine v3.0 339
• AutoFact: Ubiquitin carrier protein n=1 Tax=Populus trichocarpa RepID=B9HDK6_POPTR 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.76395e-41
N-terminus
sp_v3.0_unigene139111 SustainPine v3.0 244
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=A9NTD0_PICSI 8.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.029e-11
C-terminus
sp_v3.0_unigene140699 SustainPine v3.0 566
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=D5A9Q7_PICSI 0.0
• FL-Next: sp=Ubiquitin-conjugating enzyme E2 20; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ubiquitin carrier protein 0.0
N-terminus
sp_v3.0_unigene143084 SustainPine v3.0 462
• AutoFact: Ubiquitin-conjugating enzyme 13, E2 n=3 Tax=Embryophyta RepID=D8QMV8_SELML 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.88615e-42
Putative N-terminus
sp_v3.0_unigene143515 SustainPine v3.0 325
• AutoFact: Ubiquitin carrier protein n=1 Tax=Ricinus communis RepID=B9SRR5_RICCO 4.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 1.55544e-43
Misassembled
sp_v3.0_unigene144652 SustainPine v3.0 400
• AutoFact: Ubiquitin carrier protein n=1 Tax=Sorghum bicolor RepID=C5XGM7_SORBI 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 3.401e-19
Internal
sp_v3.0_unigene150780 SustainPine v3.0 392
• AutoFact: PREDICTED: similar to Chain A, Ubiquitin-Conjugating Enzyme Hspc150, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI00015554AA 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 4.198e-07
Putative C-terminus
sp_v3.0_unigene150871 SustainPine v3.0 326
• AutoFact: Ubiquitin carrier protein n=1 Tax=Toxoplasma gondii RepID=Q1JSN8_TOXGO 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Putative C-terminus
sp_v3.0_unigene151133 SustainPine v3.0 397
• AutoFact: Ubiquitin carrier protein n=2 Tax=Bacillariophyta RepID=B7G7K7_PHATC 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
C-terminus
sp_v3.0_unigene151440 SustainPine v3.0 151
• AutoFact: Ubiquitin carrier protein n=3 Tax=Poaceae RepID=Q6YUS2_ORYSJ 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ubiquitin carrier protein 0.0
Internal
sp_v3.0_unigene151512 SustainPine v3.0 558
• AutoFact: Ubiquitin-conjugating enzyme E2 n=1 Tax=Dictyostelium fasciculatum RepID=F4Q0Q7_9MYCE 8.99998e-41
• FL-Next: sp=Ubiquitin-conjugating enzyme E2 11; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Ubiquitin carrier protein 1.255e-34
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain