Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: regulation of sequence-specific DNA binding transcription factor activity

Term: GO:0051090  Help

Source: GO from Sma3

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene3289 SustainPine v3.0 3041
• AutoFact: phaseolin G-box binding protein PG1 [Phaseolus vulgaris] 0.0
• FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew). 0.0
• Sma3: MYC transcription factor 1.842e-08
C-terminus
sp_v3.0_unigene6260 SustainPine v3.0 2445
• AutoFact: transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] ref|NP_849592.1| transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] ref|NP_001030969.1| transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] gb 0.0
• FL-Next: tr=Os01g0510800 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Transcription initiation factor tfiid, putative 3.309e-08
Complete
sp_v3.0_unigene8044 SustainPine v3.0 1123
• AutoFact: putative MYC transcription factor [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew). 0.0
• Sma3: MYC transcription factor 2.951e-08
C-terminus
sp_v3.0_unigene43000 SustainPine v3.0 938
• AutoFact: MYC transcription factor [Solanum tuberosum] 0.0
• FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew). 0.0
• Sma3: MYC transcription factor 1.042e-08
N-terminus
sp_v3.0_unigene67246 SustainPine v3.0 436
• AutoFact: transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] ref|NP_849592.1| transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] ref|NP_001030969.1| transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] gb 1.0e-11
• FL-Next: tr=Transcription initiation factor TFIID subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
N-terminus
sp_v3.0_unigene78477 SustainPine v3.0 172
• AutoFact: MYC transcription factor [Solanum tuberosum] 8.0e-09
• FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew). 0.0
Internal
sp_v3.0_unigene93740 SustainPine v3.0 1596
• AutoFact: phaseolin G-box binding protein PG2 [Phaseolus vulgaris] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: MYC transcription factor 2.626e-08
C-terminus
sp_v3.0_unigene100212 SustainPine v3.0 357
• AutoFact: transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] ref|NP_849592.1| transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] ref|NP_001030969.1| transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] gb 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene108203 SustainPine v3.0 547
• AutoFact: putative transcription factor BHLH6 [Arabidopsis thaliana] 2.0e-25
• FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew). 0.0
N-terminus
sp_v3.0_unigene183900 SustainPine v3.0 325
• AutoFact: MYC transcription factor [Solanum tuberosum] 4.0e-34
• FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew). 0.0
• Sma3: DNA binding protein, putative 4.749e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain