Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RHC1A

Source: Description from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3253 SustainPine v3.0 2798
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0P5_RICCO 4.2039e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RHC1A 1.074e-06
Complete
sp_v3.0_unigene4107 SustainPine v3.0 1542
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974448.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001030874.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAK76657.1| unknown protein [Arabid 7.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RHC1A 2.202e-07
Complete
sp_v3.0_unigene48203 SustainPine v3.0 827
AutoFact: putative zinc finger protein [Oryza sativa Japonica Group] gb|AAP54362.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa Japonica Group] dbj|BAG95571.1| unnamed protein product [Oryza sativa Japonica Group] 6.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RHC1A 5.382e-21
C-terminus
sp_v3.0_unigene74899 SustainPine v3.0 240
AutoFact: putative zinc finger protein [Oryza sativa Japonica Group] gb|AAP54362.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa Japonica Group] dbj|BAG95571.1| unnamed protein product [Oryza sativa Japonica Group] 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RHC1A 3.68e-07
Internal
sp_v3.0_unigene131448 SustainPine v3.0 339
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAB11261.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36261.1| unknown protein [Arabidopsis thaliana] gb|AAM14133.1| unknown protein [Arabidopsis thaliana] gb|AED96751.1| RING/U-bo 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RHC1A 2.377e-14
Internal
sp_v3.0_unigene164787 SustainPine v3.0 362
AutoFact: ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana] ref|NP_973651.1| ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana] ref|NP_973652.1| ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana] gb|AAB86443.1| expressed protein [Arabidopsi 7.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RHC1A 1.545e-16
Internal
sp_v3.0_unigene208578 SustainPine v3.0 416
AutoFact: ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana] ref|NP_973651.1| ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana] ref|NP_973652.1| ubiquitin-protein ligase RNF115/126 [Arabidopsis thaliana] gb|AAB86443.1| expressed protein [Arabidopsi 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RHC1A 1.489e-13
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain