Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: DNA metabolic process

Term: GO:0006259  Help

Source: GO from Sma3

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene157424 SustainPine v3.0 570
AutoFact: 26S proteasome regulatory subunit rpn-1 [Ajellomyces capsulatus NAm1] gb|EDN06063.1| 26S proteasome regulatory subunit rpn-1 [Ajellomyces capsulatus NAm1] 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative 26S proteasome regulatory subunit S2 1.691e-12
C-terminus
sp_v3.0_unigene160014 SustainPine v3.0 334
AutoFact: DNA repair protein RAD51-like 2 [Arabidopsis thaliana] gb|AEC08140.1| DNA repair protein RAD51-like 2 [Arabidopsis thaliana] 3.0e-19
FL-Next: sp=DNA repair protein RAD51 homolog 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene164074 SustainPine v3.0 237
AutoFact: putative RecA protein [Oryza sativa Japonica Group] 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene165363 SustainPine v3.0 461
AutoFact: double-strand break repair protein MRE11 [Arabidopsis thaliana] sp|Q9XGM2.1|MRE11_ARATH RecName: Full=Double-strand break repair protein MRE11 emb|CAB50793.1| Mre11 protein [Arabidopsis thaliana] dbj|BAB10749.1| DNA repair and meiosis protein Mre11 [Arabi 0.0
FL-Next: sp=Double-strand break repair protein MRE11; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Mre11 DNA repair/recombination protein 1.336e-12
N-terminus
sp_v3.0_unigene166903 SustainPine v3.0 199
AutoFact: 26S proteasome regulatory subunit N1 [Arabidopsis thaliana] sp|Q9SIV2.2|RPN1A_ARATH RecName: Full=26S proteasome non-ATPase regulatory subunit 2 1A; AltName: Full=26S proteasome regulatory subunit RPN1 A; Short=AtRPN1a; AltName: Full=26S proteasome regula 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative 26S proteasome regulatory subunit S2 1.243e-12
Internal
sp_v3.0_unigene167159 SustainPine v3.0 141
AutoFact: essential meiotic endonuclease 1A [Arabidopsis thaliana] gb|AAP21264.1| At2g21800 [Arabidopsis thaliana] dbj|BAE99972.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07223.1| essential meiotic endonuclease 1A [Arabidopsis thaliana] 5.0e-10
FL-Next: sp=Crossover junction endonuclease EME1B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene183155 SustainPine v3.0 544
AutoFact: 26S proteasome regulatory subunit N1 [Arabidopsis thaliana] sp|Q9SIV2.2|RPN1A_ARATH RecName: Full=26S proteasome non-ATPase regulatory subunit 2 1A; AltName: Full=26S proteasome regulatory subunit RPN1 A; Short=AtRPN1a; AltName: Full=26S proteasome regula 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative 26S proteasome regulatory subunit S2 1.968e-12
Internal
sp_v3.0_unigene194960 SustainPine v3.0 516
AutoFact: DNA repair protein RAD51-like 3 [Arabidopsis thaliana] sp|Q8GXF0.2|RA51C_ARATH RecName: Full=DNA repair protein RAD51 homolog 3; AltName: Full=DNA repair-recombination protein RAD51C; Short=AtRAD51C emb|CAC14294.1| Rad51C protein [Arabidopsis thaliana] db 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Rad51 DNA recombinase 3 4.556e-09
N-terminus
sp_v3.0_unigene198585 SustainPine v3.0 682
AutoFact: endonuclease [Arabidopsis thaliana] 6.0e-15
FL-Next: sp=Crossover junction endonuclease MUS81; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain