Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: cytosolic small ribosomal subunit

Term: GO:0022627  Help

Source: GO from Sma3

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene209521 SustainPine v3.0 223
• AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 8.625e-11
N-terminus
sp_v3.0_unigene209619 SustainPine v3.0 241
• AutoFact: PREDICTED: similar to 40S ribosomal protein S3a (V-fos transformation effector protein) isoform 11 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2EC6 9.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 2.74e-17
N-terminus
sp_v3.0_unigene209720 SustainPine v3.0 371
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 3.0e-25
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S21 1.081e-14
Complete
sp_v3.0_unigene209808 SustainPine v3.0 261
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 8.0e-17
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S21e, putative 6.271e-09
C-terminus
sp_v3.0_unigene209816 SustainPine v3.0 307
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 8.0e-25
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S21 6.054e-11
N-terminus
sp_v3.0_unigene210232 SustainPine v3.0 299
• AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S2 4.504e-15
Internal
sp_v3.0_unigene210272 SustainPine v3.0 246
• AutoFact: 40S ribosomal protein S3a-1 [Arabidopsis thaliana] sp|Q9CAV0.3|RS3A1_ARATH RecName: Full=40S ribosomal protein S3a-1 gb|AAG51414.1|AC009465_14 putative 40S ribosomal protein S3A (S phase specific); 75194-73527 [Arabidopsis thaliana] gb|AAL32874.1| putativ 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 1.041e-24
Putative C-terminus
sp_v3.0_unigene210316 SustainPine v3.0 815
• AutoFact: 40S ribosomal protein S21 n=2 Tax=Picea sitchensis RepID=A9NJY4_PICSI 2.0e-20
• FL-Next: sp=40S ribosomal protein S21; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S21e, putative 4.045e-09
Complete
sp_v3.0_unigene210444 SustainPine v3.0 366
• AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S11 8.625e-11
N-terminus
sp_v3.0_unigene210498 SustainPine v3.0 329
• AutoFact: ribosomal protein S15 [Argopecten irradians] 7.9874e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S15 8.11e-17
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain